RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 GAP43P17677 238 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 EIF2DP41214 584 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 MAGEA11P43364 429 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 MAN2A2P49641 1150 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 RARRES1P49788 294 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 WNT3AP56704 352 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 FAM3BP58499 235 aaPredicted RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 MTA1Q13330 715 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 RIN1Q13671 783 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 PDE1CQ14123 709 aaPredicted RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 PTPAQ15257 358 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 TBCEQ15813 527 aaPredicted RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 TMEM266Q2M3C6 531 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 USP41Q3LFD5 358 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 C1QTNF12Q5T7M4 302 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 CES5AQ6NT32 575 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 CLEC9AQ6UXN8 241 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 B4GALNT4Q76KP1 1039 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 GALNT5Q7Z7M9 940 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 CFAP52Q8N1V2 620 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 TTC39CQ8N584 583 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 SYT2Q8N9I0 419 aaPredicted RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 TBCKQ8TEA7 893 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 SNX21Q969T3 373 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 C12orf65Q9H3J6 166 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 NXF3Q9H4D5 531 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 NRDE2Q9H7Z3 1164 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 GCM1Q9NP62 436 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 CEP72Q9P209 647 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 NAALADL1Q9UQQ1 740 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 C2CD2Q9Y426 696 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 PIAS3Q9Y6X2 628 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 TMEM8BA6NDV4 472 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 AGAP5A6NIR3 686 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 E7EVH7 732 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 PER2O15055 1255 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 CTDNEP1O95476 244 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 MTHFD1P11586 935 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 DRD1P21728 446 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 LAMTOR4Q0VGL1 99 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 TBCCQ15814 346 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 ATXN7L2Q5T6C5 722 aaPredicted RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 GET4Q7L5D6 327 aaPredicted RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 ZSWIM9Q86XI8 627 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 ZBTB8OSQ8IWT0 167 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 ADAMTS18Q8TE60 1221 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 ZNF483Q8TF39 744 aaPredicted RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 THAP4Q8WY91 577 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 CENPIQ92674 756 aaPredicted RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 TCF25Q9BQ70 676 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 MARCH5Q9NX47 278 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 NFE2L3Q9Y4A8 694 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 SF3B1O75533 1304 aaKnown RBP eCLIP5.19□□□□□ -1.582e-7■■■■■ 58.5
NEK1-204ENST00000509912 DENND4CQ5VZ89 1909 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 VIPP01282 170 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 VSIG10L2P0DP72 767 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 FDPSP14324 419 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 FDXRP22570 491 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 YWHABP31946 246 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 HOXD12P35452 270 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 PNPLA4P41247 253 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 SSR1P43307 286 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 GLUD2P49448 558 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 HARS2P49590 506 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 CLRN1P58418 232 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 NLRP5P59047 1200 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 HSD11B2P80365 405 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 SP140Q13342 867 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 DCTN2Q13561 401 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 FHL3Q13643 280 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 EMC2Q15006 297 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 ARHGAP40Q5TG30 622 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 TMCO3Q6UWJ1 677 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 DPY19L3Q6ZPD9 716 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 PPP1R32Q7Z5V6 425 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 WDR5BQ86VZ2 330 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 ZSCAN30Q86W11 494 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 CMTM4Q8IZR5 234 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 METTL25Q8N6Q8 603 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 TDRD5Q8NAT2 981 aaKnown RBP5.19□□□□□ -1.58
NEK1-204ENST00000509912 SPATA17Q96L03 361 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 XPNPEP1Q9NQW7 623 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 TM7SF3Q9NS93 570 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 IL37Q9NZH6 218 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 RAB21Q9UL25 225 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 GINS2Q9Y248 185 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 PCDHGA5Q9Y5G8 931 aa5.19□□□□□ -1.58
NEK1-204ENST00000509912 MBD3L4A6NDZ8 208 aaPredicted RBP5.18□□□□□ -1.58
NEK1-204ENST00000509912 MBD3L3A6NE82 208 aaPredicted RBP5.18□□□□□ -1.58
NEK1-204ENST00000509912 DDX39AO00148 427 aaKnown RBP5.18□□□□□ -1.58
NEK1-204ENST00000509912 TOR1BO14657 336 aa5.18□□□□□ -1.58
NEK1-204ENST00000509912 ZNF185O15231 689 aa5.18□□□□□ -1.58
NEK1-204ENST00000509912 TUBB4AP04350 444 aa5.18□□□□□ -1.58
NEK1-204ENST00000509912 CSF1P09603 554 aa5.18□□□□□ -1.58
NEK1-204ENST00000509912 GTF2BQ00403 316 aa5.18□□□□□ -1.58
NEK1-204ENST00000509912 CCNG2Q16589 344 aa5.18□□□□□ -1.58
NEK1-204ENST00000509912 BMT2Q1RMZ1 405 aa5.18□□□□□ -1.58
NEK1-204ENST00000509912 USP30Q70CQ3 517 aa5.18□□□□□ -1.58
NEK1-204ENST00000509912 TMEM86AQ8N2M4 240 aa5.18□□□□□ -1.58
NEK1-204ENST00000509912 GNRHR2Q96P88 292 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms