RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CCDC189A1A4V9 331 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 CAPN8A6NHC0 703 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 BCAS2O75934 225 aaPredicted RBP18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 MYCNP04198 464 aaPredicted RBP18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 PIM1P11309 404 aaPredicted RBP18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 MSX2P35548 267 aaPredicted RBP18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 PRAMEP78395 509 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 SLC10A7Q0GE19 358 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 PTK2BQ14289 1009 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 SLC14A2Q15849 920 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 OR13J1Q8NGT2 312 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 UBXN10Q96LJ8 280 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 GCNAQ96QF7 691 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 MEAF6Q9HAF1 191 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 PRDM5Q9NQX1 630 aaPredicted RBP18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 EPS15L1Q9UBC2 864 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 UBDO15205 165 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 GPC4O75487 556 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 KCNA5P22460 613 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 DPP6P42658 865 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 MS4A2Q01362 244 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 DSC2Q02487 901 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 CACNB2Q08289 660 aaPredicted RBP18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 GALNT1Q10472 559 aaPredicted RBP18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 ADGRE1Q14246 886 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 SQLEQ14534 574 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 MS4A13Q5J8X5 152 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 THEMIS2Q5TEJ8 643 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 RASIP1Q5U651 963 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 SDHAF4Q5VUM1 108 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 GK5Q6ZS86 529 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 CHSY3Q70JA7 882 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 RASAL3Q86YV0 1011 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 ATP6V0D2Q8N8Y2 350 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 PHF21BQ96EK2 531 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 ZCWPW1Q9H0M4 648 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 MFSD1Q9H3U5 465 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 ZFYVE28Q9HCC9 887 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 ADA2Q9NZK5 511 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 STX16-NPEPL1H3BU86 382 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 TRIM38O00635 465 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 HAPLN1P10915 354 aaPredicted RBP18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 SLC26A3P40879 764 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 CHN2P52757 468 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 POLE2P56282 527 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 GRM2Q14416 872 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 NFE2Q16621 373 aaPredicted RBP18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 DDR2Q16832 855 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 CST9Q5W186 159 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 FUBP3Q96I24 572 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 TRMOQ9BU70 441 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 NOD1Q9Y239 953 aa18.03■□□□□ 0.48
CCHCR1-228ENST00000509552 MYO16Q9Y6X6 1858 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 ASGR1P07306 291 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 PLK1P53350 603 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 ILF2Q12905 390 aaKnown RBP18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 LIN52Q52LA3 116 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 GLB1LQ6UWU2 654 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 ZNF683Q8IZ20 524 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 GALNT15Q8N3T1 639 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 HDAC10Q969S8 669 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 PSMG2Q969U7 264 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 C8orf48Q96LL4 319 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 COPS7BQ9H9Q2 264 aaPredicted RBP18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 TRPC7Q9HCX4 862 aa18.02■□□□□ 0.48
CCHCR1-228ENST00000509552 MIA3Q5JRA6 1907 aa18.02■□□□□ 0.47
CCHCR1-228ENST00000509552 MROH6A6NGR9 719 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 PSMD12O00232 456 aaPredicted RBP18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 CNTN5O94779 1100 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 MMP2P08253 660 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 IMPDH1P20839 514 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 PSME3P61289 254 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 EFEMP1Q12805 493 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 FASTKQ14296 549 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 ALFQ53S48 1182 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 ZNF598Q86UK7 904 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 SPATA24Q86W54 205 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 IFNL1Q8IU54 200 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 TEX26Q8N6G2 289 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 ADCY4Q8NFM4 1077 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 ANKRD49Q8WVL7 239 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 BTN2A3PQ96KV6 586 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 UXTQ9UBK9 157 aaPredicted RBP18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 DENRO43583 198 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 OAZ2O95190 189 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 PDAP1Q13442 181 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 SIRPB2Q5JXA9 342 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 FAM45BPQ6NSW5 357 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 FAM45AQ8TCE6 357 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 ALG9Q9H6U8 611 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 GMIPQ9P107 970 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 RIMS3Q9UJD0 308 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 RAB26Q9ULW5 256 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 DNAH12Q6ZR08 3092 aa18.01■□□□□ 0.47
CCHCR1-228ENST00000509552 ACOT8O14734 319 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 INPPL1O15357 1258 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 S1PR4O95977 384 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 PENKP01210 267 aaPredicted RBP18■□□□□ 0.47
CCHCR1-228ENST00000509552 TCN1P20061 433 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms