RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 KCTD21Q4G0X4 260 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CTXN3Q4LDR2 81 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 FAM76BQ5HYJ3 339 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SAPCD1Q5SSQ6 148 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 DEPDC1Q5TB30 811 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CACHD1Q5VU97 1274 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SLC22A25Q6T423 547 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 METAP1DQ6UB28 335 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 ISLR2Q6UXK2 745 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TPGS1Q6ZTW0 290 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 DENND5BQ6ZUT9 1274 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 STXBP4Q6ZWJ1 553 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TMTC3Q6ZXV5 915 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TAF8Q7Z7C8 310 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 GLRX5Q86SX6 157 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TLK2Q86UE8 772 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 MON1AQ86VX9 555 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TPRA1Q86W33 373 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CHD1LQ86WJ1 897 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CAMK1DQ8IU85 385 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TRIM59Q8IWR1 403 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SYCE1Q8N0S2 351 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 ARFGAP2Q8N6H7 521 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF527Q8NB42 609 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 FANCBQ8NB91 859 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 NSUN7Q8NE18 718 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 C1orf162Q8NEQ5 155 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TTLQ8NG68 377 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CHTF18Q8WVB6 975 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 DPF2Q92785 391 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 GRAMD1AQ96CP6 724 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CHMP6Q96FZ7 201 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 PDLIM5Q96HC4 596 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 ZBED3Q96IU2 234 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 FEM1CQ96JP0 617 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 FCRL4Q96PJ5 515 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TUBGCP5Q96RT8 1024 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SORBS1Q9BX66 1292 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 STRA6Q9BX79 667 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 MTFR1LQ9H019 292 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 OR10A2Q9H208 303 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 NRBP2Q9NSY0 501 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 DDX28Q9NUL7 540 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 AGPAT5Q9NUQ2 364 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 THAP1Q9NVV9 213 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 MRPL39Q9NYK5 338 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 STX18Q9P2W9 335 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 UXTQ9UBK9 157 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SEC63Q9UGP8 760 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TSPYL4Q9UJ04 414 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 FBXL7Q9UJT9 491 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 MAGED2Q9UNF1 606 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 FADS3Q9Y5Q0 445 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CACNG2Q9Y698 323 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CYP46A1Q9Y6A2 500 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 ATP23Q9Y6H3 246 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 PIAS3Q9Y6X2 628 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 NPC1L1Q9UHC9 1359 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SYNJ2O15056 1496 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 ABCC10Q5T3U5 1492 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 MAGI2Q86UL8 1455 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 FAM135AQ9P2D6 1515 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 POLR2AP24928 1970 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 LOC100506127A0A0U1RQW1 187 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CCDC151A5D8V7 595 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ZSCAN5BA6NJL1 495 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 AGAP14A8MT82 685 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 AHRRA9YTQ3 701 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 GOLGA8KD6RF30 607 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ACKR2O00590 384 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PCDH17O14917 1159 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CD3EAPO15446 510 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 GATCO43716 136 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 TLR2O60603 784 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 TBX10O75333 385 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 MED24O75448 989 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 GCATO75600 419 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 BEST1O76090 585 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ELP1O95163 1332 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CCNDBP1O95273 360 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 GCNT3O95395 438 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PIGNO95427 931 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 LCA5LO95447 670 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 FYNP06241 537 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 EPHX1P07099 455 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ACAA1P09110 424 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 STAG3L3P0CL85 134 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 FGFR1P11362 822 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 KRT5P13647 590 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CCDC130P13994 396 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 VCLP18206 1134 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 EIF2S2P20042 333 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 MAPK4P31152 587 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PCGF2P35227 344 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 MAGEA4P43358 317 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 IQGAP1P46940 1657 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 NEK4P51957 841 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PLOD1Q02809 727 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CREB5Q02930 508 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms