RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DLL3Q9NYJ7 618 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 FNDC3AQ9Y2H6 1198 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 ALG6Q9Y672 507 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 COL27A1Q8IZC6 1860 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 A0A1B0GVT2 93 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 A0A1W2PPC4 97 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 A0A1W2PQU0 124 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 MACROD2A1Z1Q3 448 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 FAM181BA6NEQ2 426 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 FAM47DPA6NHR8 397 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 ARHGAP42A6NI28 874 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 C16orf96A6NNT2 1141 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 MEI4A8MW99 385 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 C1QTNF3-AMACRE9PGA6 284 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 KRIT1O00522 736 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 SLC7A4O43246 635 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 LRP3O75074 770 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 PALMO75781 387 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 RHOBTB1O94844 696 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 ACADMP11310 421 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 TNNT1P13805 278 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 ENGP17813 658 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 LHCGRP22888 699 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 MAT2AP31153 395 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 IGFALSP35858 605 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 MMP12P39900 470 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 ARL4AP40617 200 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 SSR1P43307 286 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 DNA2P51530 1060 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNF135P52742 658 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 DYNLT1P63172 113 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 DSC2Q02487 901 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 LBRQ14739 615 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 PRKD1Q15139 912 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 RSPO4Q2I0M5 234 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 TSNAXIP1Q2TAA8 658 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 MYLK3Q32MK0 819 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 SLC23A3Q6PIS1 610 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 ERN2Q76MJ5 926 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 C11orf74Q86VG3 221 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 TRIM69Q86WT6 500 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 CAMK1DQ8IU85 385 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 KATNAL2Q8IYT4 538 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 ATPAF2Q8N5M1 289 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 OR14C36Q8NHC7 312 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 SREK1Q8WXA9 508 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 HAUS1Q96CS2 278 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 HDAC11Q96DB2 347 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 GDAP1L1Q96MZ0 367 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 KLHL32Q96NJ5 620 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 KLF6Q99612 283 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 FAM118BQ9BPY3 351 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 HEPHQ9BQS7 1158 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 SP110Q9HB58 689 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 NOD2Q9HC29 1040 aa7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 R3HDM2Q9Y2K5 976 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-207ENST00000509162 KNL1Q8NG31 2342 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 ZSCAN5CA6NGD5 496 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 TTLL8A6PVC2 850 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 KCNK1O00180 336 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 KCNK3O14649 394 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 HTRA2O43464 458 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 SPOPO43791 374 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 RNGTTO60942 597 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 IGSF6O95976 241 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 PRLP01236 227 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 PRNPP04156 253 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 KRT7P08729 469 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 CD27P26842 260 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 OXTRP30559 389 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 CD68P34810 354 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 SLC1A1P43005 524 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 CTSKP43235 329 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 MAPK8P45983 427 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 CCR5P51681 352 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 NEK3P51956 506 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 CLDN2P57739 230 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 FAM193AP78312 1265 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 IFI35P80217 286 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 DAB2P98082 770 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 SLC20A2Q08357 652 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 PPIDQ08752 370 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 WASHC5Q12768 1159 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 PDK2Q15119 407 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 NOMO1Q15155 1222 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 TEAD4Q15561 434 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 HADHQ16836 314 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 KIF19Q2TAC6 998 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF805Q5CZA5 627 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 SPDYCQ5MJ68 293 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 TBCELQ5QJ74 424 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 RFLNAQ6ZTI6 216 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 KANSL1Q7Z3B3 1105 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 TSPAN33Q86UF1 283 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 VSIG1Q86XK7 387 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF354CQ86Y25 554 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 LRRC8AQ8IWT6 810 aa7.27□□□□□ -1.25
TOPBP1-207ENST00000509162 RHOT1Q8IXI2 618 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms