RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 RALGPS1Q5JS13 557 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 AFMIDQ63HM1 303 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 RBM44Q6ZP01 1051 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 EFL1Q7Z2Z2 1120 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 NSMCE1Q8WV22 266 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 VOPP1Q96AW1 172 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 WRAP53Q9BUR4 548 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 SNRNP25Q9BV90 132 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 SLC39A8Q9C0K1 460 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 KLC2Q9H0B6 622 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 PCDH12Q9NPG4 1184 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 THSD1Q9NS62 852 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 HAUS2Q9NVX0 235 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 SEPT3Q9UH03 358 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 KLF15Q9UIH9 416 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 IGSF10Q6WRI0 2623 aa13.71□□□□□ -0.22
CCHCR1-227ENST00000508852 LRRK1Q38SD2 2015 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 LY6G6EA0A0G2JKS1 128 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 A0A1B0GTH6 734 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 CPED1A4D0V7 1026 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 J3KR12 359 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 CACNB4O00305 520 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 TLX3O43711 291 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 USP12O75317 370 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 PIGNO95427 931 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 HOXC4P09017 264 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 KRT10P13645 584 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 C6P13671 934 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 ERCC2P18074 760 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 RBMS1P29558 406 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 MIPP30301 263 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 SERPINB6P35237 376 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 MMP12P39900 470 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 CLDN6P56747 220 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 OGDHQ02218 1023 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 PIGHQ14442 188 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 NFATC4Q14934 902 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 IRF4Q15306 451 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 CDKN3Q16667 212 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 PPP6R3Q5H9R7 873 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 LRRC49Q8IUZ0 686 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 SPOCK2Q92563 424 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 SYN2Q92777 582 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 ZNF653Q96CK0 615 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 EXOC2Q96KP1 924 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 PSKH2Q96QS6 385 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 APOOQ9BUR5 198 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 LRRC61Q9BV99 259 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 DPH1Q9BZG8 443 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 ISCUQ9H1K1 167 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 TAS2R14Q9NYV8 317 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 U3KQA8 63 aa13.7□□□□□ -0.22
CCHCR1-227ENST00000508852 TEX51A0A1B0GUA7 166 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 A0A1W2PQJ5 194 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 CAPN8A6NHC0 703 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 DFFAO00273 331 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 TNFRSF10CO14798 259 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 YY2O15391 372 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 INSIG1O15503 277 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 SOCS5O75159 536 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 LRCH4O75427 683 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 TNFP01375 233 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 ELFN1P0C7U0 828 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 TSHRP16473 764 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 LIG3P49916 1009 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 GABREP78334 506 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 PEX6Q13608 980 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 ISXQ2M1V0 245 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 TSR1Q2NL82 804 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 WSCD2Q2TBF2 565 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 SOWAHCQ53LP3 525 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 ENPP7Q6UWV6 458 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 ZNF571Q7Z3V5 609 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 ARL10Q8N8L6 244 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 ECHDC3Q96DC8 303 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 CELF6Q96J87 481 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 WDR92Q96MX6 357 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 KCTD15Q96SI1 283 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 LGMNQ99538 433 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 PRORYQ9H606 182 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 MBNL1Q9NR56 388 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 TMEM63CQ9P1W3 806 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 KLQ9UEF7 1012 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 LCMT1Q9UIC8 334 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 PADI4Q9UM07 663 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 PCDHGA8Q9Y5G5 932 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 DGKBQ9Y6T7 804 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 SHROOM3Q8TF72 1996 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 CELSR3Q9NYQ7 3312 aa13.69□□□□□ -0.22
CCHCR1-227ENST00000508852 ZW10O43264 779 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 GCATO75600 419 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 SCNN1BP51168 640 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 KIAA1024LP59773 190 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 SRP54P61011 504 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 EIF3IQ13347 325 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 COL9A2Q14055 689 aaPredicted RBP13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 SPIDRQ14159 915 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 ZNF235Q14590 738 aa13.68□□□□□ -0.22
CCHCR1-227ENST00000508852 INPP5AQ14642 412 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms