RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 DNAJC3Q13217 504 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 LRRC14Q15048 493 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 PAFAH1B3Q15102 231 aaKnown RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 IRF4Q15306 451 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 TCEA2Q15560 299 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 IFI16Q16666 785 aaKnown RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 TMEM52BQ4KMG9 183 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 KAZNQ674X7 775 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 TIGD7Q6NT04 549 aaPredicted RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 NPNTQ6UXI9 565 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 KYAT3Q6YP21 454 aaKnown RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 DBX2Q6ZNG2 339 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 B4GALNT4Q76KP1 1039 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 ABI3BPQ7Z7G0 1075 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 ZSCAN30Q86W11 494 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 RHOT1Q8IXI2 618 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 CCDC170Q8IYT3 715 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 PQLC3Q8N755 202 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 FAM71BQ8TC56 605 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 HCAR2Q8TDS4 363 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 NSMCE3Q96MG7 304 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 LENG8Q96PV6 779 aaPredicted RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 RNF157Q96PX1 679 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 NUDCD1Q96RS6 583 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 KLF6Q99612 283 aaPredicted RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 SEMA3CQ99985 751 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 MGME1Q9BQP7 344 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 LUC7LQ9NQ29 371 aaKnown RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 MBNL1Q9NR56 388 aaKnown RBP9.45□□□□□ -0.9
DDX41-209ENST00000508279 RBM22Q9NW64 420 aaKnown RBP eCLIP9.45□□□□□ -0.9
DDX41-209ENST00000508279 UCKL1Q9NWZ5 548 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 SEPT10Q9P0V9 454 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 KLK13Q9UKR3 277 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 SSUH2Q9Y2M2 353 aa9.45□□□□□ -0.9
DDX41-209ENST00000508279 MYLKQ15746 1914 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 PLXNB3Q9ULL4 1909 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 TSPAN11A1L157 253 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 GOLGA6CA6NDK9 693 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 GOLGA6BA6NDN3 693 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 SCAMP1O15126 338 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 MATN3O15232 486 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 PIAS2O75928 621 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 MTA2O94776 668 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 TRIM16O95361 564 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 GOLGA6DP0CG33 693 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 CCNB1P14635 433 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 JUNDP17535 347 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 CTPS1P17812 591 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 MX2P20592 715 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 DGKAP23743 735 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 MMP12P39900 470 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 SLC1A1P43005 524 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 SUOXP51687 545 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 EPHB1P54762 984 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 DAB2P98082 770 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 DSC2Q02487 901 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 AP1B1Q10567 949 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 SLC10A2Q12908 348 aaPredicted RBP9.44□□□□□ -0.9
DDX41-209ENST00000508279 TRAF2Q12933 501 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 FZD2Q14332 565 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 ACOX1Q15067 660 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 TPRG1LQ5T0D9 272 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 ARMC12Q5T9G4 340 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 RD3Q7Z3Z2 195 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 GLRX5Q86SX6 157 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 PARGQ86W56 976 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 MARCH9Q86YJ5 346 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 DCP2Q8IU60 420 aaKnown RBP9.44□□□□□ -0.9
DDX41-209ENST00000508279 TMTC1Q8IUR5 882 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 LRRC49Q8IUZ0 686 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 CCDC50Q8IVM0 306 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 CCDC13Q8IYE1 715 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 TP53I13Q8NBR0 393 aaPredicted RBP9.44□□□□□ -0.9
DDX41-209ENST00000508279 DENND6BQ8NEG7 585 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 BAHD1Q8TBE0 780 aaPredicted RBP9.44□□□□□ -0.9
DDX41-209ENST00000508279 FAM174AQ8TBP5 190 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 CENPTQ96BT3 561 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 FAF2Q96CS3 445 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 PANX2Q96RD6 677 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 LGMNQ99538 433 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 CEP41Q9BYV8 373 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 DDX56Q9NY93 547 aaKnown RBP9.44□□□□□ -0.9
DDX41-209ENST00000508279 GOLGA6AQ9NYA3 693 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 DTLQ9NZJ0 730 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 B4GALT6Q9UBX8 382 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 ALG6Q9Y672 507 aa9.44□□□□□ -0.9
DDX41-209ENST00000508279 EPN1Q9Y6I3 576 aaPredicted RBP9.44□□□□□ -0.9
DDX41-209ENST00000508279 TPRP12270 2363 aaKnown RBP9.44□□□□□ -0.9
DDX41-209ENST00000508279 COL5A1P20908 1838 aaPredicted RBP9.43□□□□□ -0.9
DDX41-209ENST00000508279 A0A0U1RQS6 177 aa9.43□□□□□ -0.9
DDX41-209ENST00000508279 SPTY2D1-AS1A0A0U1RR47 76 aa9.43□□□□□ -0.9
DDX41-209ENST00000508279 FAM149AA5PLN7 773 aa9.43□□□□□ -0.9
DDX41-209ENST00000508279 C3orf70A6NLC5 250 aaPredicted RBP9.43□□□□□ -0.9
DDX41-209ENST00000508279 C1QTNF9BB2RNN3 333 aa9.43□□□□□ -0.9
DDX41-209ENST00000508279 H3BM21 787 aa9.43□□□□□ -0.9
DDX41-209ENST00000508279 KCNK1O00180 336 aa9.43□□□□□ -0.9
DDX41-209ENST00000508279 TRAFD1O14545 582 aaPredicted RBP9.43□□□□□ -0.9
DDX41-209ENST00000508279 SIGLEC6O43699 453 aa9.43□□□□□ -0.9
DDX41-209ENST00000508279 RECQL5O94762 991 aaPredicted RBP9.43□□□□□ -0.9
DDX41-209ENST00000508279 NDUFA10O95299 355 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms