RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZNF569Q5MCW4 686 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 DARS2Q6PI48 645 aaKnown RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 IL27RAQ6UWB1 636 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 USP45Q70EL2 814 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 PID1Q7Z2X4 250 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 ZSWIM9Q86XI8 627 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.1■□□□□ 0.01
RNF4-210ENST00000508235 MAIP1Q8WWC4 291 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 IMP4Q96G21 291 aaKnown RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 ORAI3Q9BRQ5 295 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 HERPUD2Q9BSE4 406 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 C1QTNF2Q9BXJ5 285 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 TLR10Q9BXR5 811 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 TDRD1Q9BXT4 1180 aaKnown RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 ADGRE3Q9BY15 652 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 SLC17A9Q9BYT1 436 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 SLC25A51Q9H1U9 297 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 SMOC1Q9H4F8 434 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 GLOD4Q9HC38 313 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 TRMT1Q9NXH9 659 aaKnown RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 RPL26L1Q9UNX3 145 aaKnown RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 ZFR2Q9UPR6 939 aaKnown RBP15.1■□□□□ 0.01
RNF4-210ENST00000508235 ITM2BQ9Y287 266 aa15.1■□□□□ 0.01
RNF4-210ENST00000508235 GON4LQ3T8J9 2241 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 DOCK9Q9BZ29 2069 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 LNP1A1A4G5 178 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 ARHGAP33O14559 1287 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 VILLO15195 856 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 SLC31A1O15431 190 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 SDHBP21912 280 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 RBL1P28749 1068 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 CD38P28907 300 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 MMP12P39900 470 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 CD86P42081 329 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 C21orf59P57076 290 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 NIPAL4Q0D2K0 466 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 WASHC5Q12768 1159 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 OVGP1Q12889 678 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 SEL1L3Q68CR1 1132 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 ITPRIPL1Q6GPH6 555 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 TCEAL6Q6IPX3 200 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 B4GALNT4Q76KP1 1039 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 DPPA4Q7L190 304 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 IQCHQ86VS3 1027 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 SLC13A5Q86YT5 568 aaPredicted RBP15.09■□□□□ 0.01
RNF4-210ENST00000508235 MFSD2AQ8NA29 543 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 TCEAL3Q969E4 200 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 NSMCE3Q96MG7 304 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 SLC6A18Q96N87 628 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 PPP1R2P1Q96PQ5 205 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 EDEM2Q9BV94 578 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 CEP41Q9BYV8 373 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 EBF2Q9HAK2 575 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 DNPEPQ9ULA0 475 aa15.09■□□□□ 0.01
RNF4-210ENST00000508235 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.09■□□□□ 0.01
RNF4-210ENST00000508235 ADAMTS9Q9P2N4 1935 aa15.08■□□□□ 0
RNF4-210ENST00000508235 PCDH15Q96QU1 1955 aa15.08■□□□□ 0
RNF4-210ENST00000508235 IGLON5A6NGN9 336 aa15.08■□□□□ 0
RNF4-210ENST00000508235 SPINT1O43278 529 aa15.08■□□□□ 0
RNF4-210ENST00000508235 FZD6O60353 706 aa15.08■□□□□ 0
RNF4-210ENST00000508235 MMP20O60882 483 aa15.08■□□□□ 0
RNF4-210ENST00000508235 PAK4O96013 591 aaPredicted RBP15.08■□□□□ 0
RNF4-210ENST00000508235 ENGP17813 658 aa15.08■□□□□ 0
RNF4-210ENST00000508235 TNNT3P45378 269 aaPredicted RBP15.08■□□□□ 0
RNF4-210ENST00000508235 CSNK1EP49674 416 aaKnown RBP15.08■□□□□ 0
RNF4-210ENST00000508235 SKOR1P84550 965 aa15.08■□□□□ 0
RNF4-210ENST00000508235 CCDC70Q6NSX1 233 aa15.08■□□□□ 0
RNF4-210ENST00000508235 ZNF567Q8N184 647 aa15.08■□□□□ 0
RNF4-210ENST00000508235 DENND6BQ8NEG7 585 aa15.08■□□□□ 0
RNF4-210ENST00000508235 PIH1D2Q8WWB5 315 aa15.08■□□□□ 0
RNF4-210ENST00000508235 SCRN2Q96FV2 425 aa15.08■□□□□ 0
RNF4-210ENST00000508235 LENG8Q96PV6 779 aaPredicted RBP15.08■□□□□ 0
RNF4-210ENST00000508235 WRAP53Q9BUR4 548 aaKnown RBP15.08■□□□□ 0
RNF4-210ENST00000508235 PCDH9Q9HC56 1237 aa15.08■□□□□ 0
RNF4-210ENST00000508235 KCTD5Q9NXV2 234 aa15.08■□□□□ 0
RNF4-210ENST00000508235 RSPH14Q9UHP6 348 aa15.08■□□□□ 0
RNF4-210ENST00000508235 GGT7Q9UJ14 662 aa15.08■□□□□ 0
RNF4-210ENST00000508235 CHKBQ9Y259 395 aa15.08■□□□□ 0
RNF4-210ENST00000508235 ZKSCAN5Q9Y2L8 839 aa15.08■□□□□ 0
RNF4-210ENST00000508235 PPIL1Q9Y3C6 166 aa15.08■□□□□ 0
RNF4-210ENST00000508235 FAM186AA6NE01 2351 aa15.07■□□□□ 0
RNF4-210ENST00000508235 TP53BP1Q12888 1972 aaPredicted RBP15.07■□□□□ 0
RNF4-210ENST00000508235 LRRK1Q38SD2 2015 aa15.07■□□□□ 0
RNF4-210ENST00000508235 FPGTO14772 594 aa15.07■□□□□ 0
RNF4-210ENST00000508235 KCNN4O15554 427 aa15.07■□□□□ 0
RNF4-210ENST00000508235 LZTS3O60299 673 aaPredicted RBP15.07■□□□□ 0
RNF4-210ENST00000508235 DFNA5O60443 496 aa15.07■□□□□ 0
RNF4-210ENST00000508235 OPHN1O60890 802 aa15.07■□□□□ 0
RNF4-210ENST00000508235 CER1O95813 267 aa15.07■□□□□ 0
RNF4-210ENST00000508235 MMP2P08253 660 aa15.07■□□□□ 0
RNF4-210ENST00000508235 ELFN1P0C7U0 828 aa15.07■□□□□ 0
RNF4-210ENST00000508235 PRLRP16471 622 aa15.07■□□□□ 0
RNF4-210ENST00000508235 VIPR1P32241 457 aa15.07■□□□□ 0
RNF4-210ENST00000508235 LIG3P49916 1009 aa15.07■□□□□ 0
RNF4-210ENST00000508235 LIMK1P53667 647 aa15.07■□□□□ 0
RNF4-210ENST00000508235 ARHGEF7Q14155 803 aa15.07■□□□□ 0
RNF4-210ENST00000508235 TMEM145Q8NBT3 493 aa15.07■□□□□ 0
RNF4-210ENST00000508235 SLC35B2Q8TB61 432 aa15.07■□□□□ 0
RNF4-210ENST00000508235 NETO1Q8TDF5 533 aa15.07■□□□□ 0
RNF4-210ENST00000508235 KLK6Q92876 244 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms