RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 VPS54Q9P1Q0 977 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 PLEKHM1Q9Y4G2 1056 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 TELO2Q9Y4R8 837 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 SAMD9LQ8IVG5 1584 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 CCDC141Q6ZP82 1450 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 C1QTNF9BB2RNN3 333 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 PYCARD-AS1I3L0S3 204 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 SCDO00767 359 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 SYN3O14994 580 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 BUB1BO60566 1050 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 ECI2O75521 394 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 ZIC2O95409 532 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 YES1P07947 543 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 AREGP15514 252 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 FUT1P19526 365 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 MCAMP43121 646 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 LEPRP48357 1165 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 TSPAN5P62079 268 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 GPLD1P80108 840 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF200P98182 395 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 SP2Q02086 613 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 PTH1RQ03431 593 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 CASP8Q14790 479 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 KCTD11Q693B1 232 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 DPY19L2P1Q6NXN4 242 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 MACC1Q6ZN28 852 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 PROSER1Q86XN7 944 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 PHYKPLQ8IUZ5 450 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 ITPRIPQ8IWB1 547 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 FAM20CQ8IXL6 584 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 HACE1Q8IYU2 909 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 CCNYQ8ND76 341 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 SLC24A4Q8NFF2 622 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 WDR48Q8TAF3 677 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 ZCCHC10Q8TBK6 192 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 GRAPLQ8TC17 118 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 DNAAF4Q8WXU2 420 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 HES6Q96HZ4 224 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 PBX4Q9BYU1 374 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 TINAGL1Q9GZM7 467 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF350Q9GZX5 532 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 ECT2Q9H8V3 914 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 HEYLQ9NQ87 328 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 TRMT6Q9UJA5 497 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 USP21Q9UK80 565 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 PLEKHA6Q9Y2H5 1048 aa7.58□□□□□ -1.2
PDGFRA-206ENST00000508170 CDC42BPBQ9Y5S2 1711 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 A0A0A6YYC8 382 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 HTR3EA5X5Y0 456 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 BTBD17A6NE02 478 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 OOEPA6NGQ2 149 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 I3L1I5 382 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 ADAMDEC1O15204 470 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 CCNT1O60563 726 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 IL1BP01584 269 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 RPLP2P05387 115 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 FESP07332 822 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 GSPT1P15170 499 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 GABRB1P18505 474 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 MYF6P23409 242 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 CDC25AP30304 524 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 NMT1P30419 496 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 UCP2P55851 309 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 COPS2P61201 443 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 NKAIN1Q4KMZ8 207 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 LIPMQ5VYY2 423 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 C18orf63Q68DL7 685 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 PTRHD1Q6GMV3 140 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 KIAA1161Q6NSJ0 714 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 MICALCLQ6ZW33 695 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 USP37Q86T82 979 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 SERPINA12Q8IW75 414 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 RHOT1Q8IXI2 618 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 TMEM116Q8NCL8 245 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 OR56A3Q8NH54 315 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 OR52J3Q8NH60 311 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 GPT2Q8TD30 523 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 RSC1A1Q92681 617 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 APBB2Q92870 758 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 CLPTM1LQ96KA5 538 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 TMEM68Q96MH6 324 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 PAFAH2Q99487 392 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 SRSF8Q9BRL6 282 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 UNKLQ9H9P5 680 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 ETNK2Q9NVF9 386 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 OGFRQ9NZT2 677 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 SENP1Q9P0U3 644 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 MAB21L2Q9Y586 359 aa7.57□□□□□ -1.2
PDGFRA-206ENST00000508170 A0A1B0GUA9 196 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 CFAP73A6NFT4 308 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 IQCF5A8MTL0 148 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 A8MZ25 164 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 HAT1O14929 419 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 CYTH3O43739 400 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 AHSGP02765 367 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 CRYGCP07315 174 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 IGFBP1P08833 259 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 FAM58BPP0C7Q3 252 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ZCCHC18P0CG32 403 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms