RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 GPR156Q8NFN8 814 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 TPCN2Q8NHX9 752 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 CXorf40AQ8TE69 158 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 NAT6Q93015 286 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 MED8Q96G25 268 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 APOOQ9BUR5 198 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 LGR4Q9BXB1 951 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 CPEB1Q9BZB8 566 aaKnown RBP13.49□□□□□ -0.25
DDX41-206ENST00000506965 SLC13A1Q9BZW2 595 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 VPS16Q9H269 839 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 LRRC19Q9H756 370 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 SYNDIG1Q9H7V2 258 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 FGF22Q9HCT0 170 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
DDX41-206ENST00000506965 NCKIPSDQ9NZQ3 722 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 FZD10Q9ULW2 581 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 ST14Q9Y5Y6 855 aa13.49□□□□□ -0.25
DDX41-206ENST00000506965 SPTA1P02549 2419 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 WASH4PA8MWX3 477 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
DDX41-206ENST00000506965 PLD2O14939 933 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 IGSF6O95976 241 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 RPLP0P05388 317 aaKnown RBP13.48□□□□□ -0.25
DDX41-206ENST00000506965 ITGB6P18564 788 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 GPD1P21695 349 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 ERCC5P28715 1186 aaPredicted RBP13.48□□□□□ -0.25
DDX41-206ENST00000506965 EPHB2P29323 1055 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 ETFBP38117 255 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 LIG3P49916 1009 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 RHOAP61586 193 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 PTK2BQ14289 1009 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 NFATC4Q14934 902 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 LRRC14Q15048 493 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 AGERQ15109 404 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 KRT31Q15323 416 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 UGP2Q16851 508 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 CLEC16AQ2KHT3 1053 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 INO80DQ53TQ3 878 aaPredicted RBP13.48□□□□□ -0.25
DDX41-206ENST00000506965 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 RD3Q7Z3Z2 195 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 ZNF677Q86XU0 584 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 PHF13Q86YI8 300 aaPredicted RBP13.48□□□□□ -0.25
DDX41-206ENST00000506965 ARHGAP12Q8IWW6 846 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 UMODL1-AS1Q8N2C9 162 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 PMEPA1Q969W9 287 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 GRAMD1AQ96CP6 724 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 PEBP4Q96S96 227 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 RBM15Q96T37 977 aaKnown RBP eCLIP13.48□□□□□ -0.253e-7■□□□□ 10.7
DDX41-206ENST00000506965 RETREG1Q9H6L5 497 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 FOXJ2Q9P0K8 574 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 FLNCQ14315 2725 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 DOPEY2Q9Y3R5 2298 aa13.48□□□□□ -0.25
DDX41-206ENST00000506965 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
DDX41-206ENST00000506965 CREB3O43889 395 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 PCCBP05166 539 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 KRT3P12035 628 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 GEMIN4P57678 1058 aaKnown RBP13.47□□□□□ -0.25
DDX41-206ENST00000506965 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
DDX41-206ENST00000506965 ZFP36L1Q07352 338 aaKnown RBP13.47□□□□□ -0.25
DDX41-206ENST00000506965 PTPRRQ15256 657 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 OGFOD3Q6PK18 319 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 CCDC81Q6ZN84 652 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 RAB11FIP2Q7L804 512 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 APTXQ7Z2E3 356 aaKnown RBP13.47□□□□□ -0.25
DDX41-206ENST00000506965 SLFN11Q7Z7L1 901 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 VASH2Q86V25 355 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 FAM114A1Q8IWE2 563 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 NPWQ8N729 165 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 TSEN2Q8NCE0 465 aaKnown RBP13.47□□□□□ -0.25
DDX41-206ENST00000506965 C3orf20Q8ND61 904 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 HTR3CQ8WXA8 447 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 ARHGEF26Q96DR7 871 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 CELF6Q96J87 481 aaKnown RBP13.47□□□□□ -0.25
DDX41-206ENST00000506965 CCNL2Q96S94 520 aaPredicted RBP13.47□□□□□ -0.25
DDX41-206ENST00000506965 SYT11Q9BT88 431 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 SLC39A8Q9C0K1 460 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 HSD3B7Q9H2F3 369 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 LRRN3Q9H3W5 708 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 SUV39H2Q9H5I1 410 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 EVA1BQ9NVM1 165 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 TMEM51Q9NW97 253 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 TAS2R14Q9NYV8 317 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 ADAM22Q9P0K1 906 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 ACSL6Q9UKU0 697 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 GPR34Q9UPC5 381 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 PCDHGA7Q9Y5G6 932 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 RNF215Q9Y6U7 377 aa13.47□□□□□ -0.25
DDX41-206ENST00000506965 PRAMEF33A0A0G2JMD5 474 aa13.46□□□□□ -0.25
DDX41-206ENST00000506965 TTC24A2A3L6 582 aaPredicted RBP13.46□□□□□ -0.25
DDX41-206ENST00000506965 ZSCAN5CA6NGD5 496 aaPredicted RBP13.46□□□□□ -0.25
DDX41-206ENST00000506965 SIGLEC16A6NMB1 481 aa13.46□□□□□ -0.25
DDX41-206ENST00000506965 C9orf172C9J069 976 aa13.46□□□□□ -0.25
DDX41-206ENST00000506965 PRAMEF10O60809 474 aa13.46□□□□□ -0.25
DDX41-206ENST00000506965 CCKBRP32239 447 aa13.46□□□□□ -0.25
DDX41-206ENST00000506965 RPIAP49247 311 aa13.46□□□□□ -0.25
DDX41-206ENST00000506965 PEX5P50542 639 aa13.46□□□□□ -0.25
DDX41-206ENST00000506965 INHBCP55103 352 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms