RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ABCB8Q9NUT2 735 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 TDP1Q9NUW8 608 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 PCMTD2Q9NV79 361 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 FGFR1OP2Q9NVK5 253 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 HCFC1R1Q9NWW0 138 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.11□□□□□ -1.11
COL4A5-208ENST00000505728 IL1RAPL1Q9NZN1 696 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 SLC17A6Q9P2U8 582 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 VPS51Q9UID3 782 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 VPS28Q9UK41 221 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 FBXO5Q9UKT4 447 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 ANKRD6Q9Y2G4 727 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 MTO1Q9Y2Z2 717 aaKnown RBP8.11□□□□□ -1.11
COL4A5-208ENST00000505728 STARD13Q9Y3M8 1113 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 ACTL7AQ9Y615 435 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 MYLKQ15746 1914 aa8.11□□□□□ -1.11
COL4A5-208ENST00000505728 ATXN2Q99700 1313 aaKnown RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 CCDC195A0A1B0GUA6 201 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 CCDC78A2IDD5 438 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 NRG2O14511 850 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 SLC9A3R1O14745 358 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 TPP1O14773 563 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 LDB2O43679 373 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 EDF1O60869 148 aaKnown RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 IL1BP01584 269 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 AHSGP02765 367 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 NEFHP12036 1026 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 COL6A2P12110 1019 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 ARNTP27540 789 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 PLA2G5P39877 138 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 MAPK8P45983 427 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 RGRP47804 291 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 LEPRP48357 1165 aaKnown RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 CD151P48509 253 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 SERPINB4P48594 390 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 RHOAP61586 193 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 AP1S1P61966 158 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 LMAN2Q12907 356 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 PDE1CQ14123 709 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 DMC1Q14565 340 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 TAF1AQ15573 450 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 PLEKHG6Q3KR16 790 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 CCDC153Q494R4 210 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 ATG16L1Q676U5 607 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 CDHR3Q6ZTQ4 885 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 YTHDF3Q7Z739 585 aaKnown RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 NUDCD3Q8IVD9 361 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 APCDD1Q8J025 514 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 OR13J1Q8NGT2 312 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 GPR150Q8NGU9 434 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 WFDC5Q8TCV5 224 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 ZNF707Q96C28 371 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 VPS39Q96JC1 886 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 LMLNQ96KR4 655 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 C1QTNF1Q9BXJ1 281 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 TDRD1Q9BXT4 1180 aaKnown RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 ADGRE3Q9BY15 652 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 UBE2ZQ9H832 354 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 SNX15Q9NRS6 342 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 HACD3Q9P035 362 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 LHX3Q9UBR4 397 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 SLC2A6Q9UGQ3 507 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 TLK1Q9UKI8 766 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 PHTF1Q9UMS5 762 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 CHKBQ9Y259 395 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 USP15Q9Y4E8 981 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-208ENST00000505728 RAI2Q9Y5P3 530 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 PIEZO1Q92508 2521 aa8.1□□□□□ -1.11
COL4A5-208ENST00000505728 A0A096LPK6 155 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 WDR91A4D1P6 747 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 FAM86C2PA6NEL3 165 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 C2orf81A6NN90 581 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 SCAMP3O14828 347 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 PLIN3O60664 434 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 RPP40O75818 363 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 CSPG5O95196 566 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 TGDSO95455 350 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 PENKP01210 267 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 PRLP01236 227 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 C2P06681 752 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 APOA4P06727 396 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 BPGMP07738 259 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 HOXB8P17481 243 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 GABRB3P28472 473 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 CRABP2P29373 138 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 CSRP3P50461 194 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 CLCN5P51795 746 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 RPL26P61254 145 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 PRAMEP78395 509 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 POU4F1Q01851 419 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 SULT2A1Q06520 285 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 USP4Q13107 963 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 CTBP1Q13363 440 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 GRM3Q14832 879 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 ZNF77Q15935 545 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 DUSP6Q16828 381 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 SLC5A9Q2M3M2 681 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 PITRM1Q5JRX3 1037 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 N4BP2L1Q5TBK1 243 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms