RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 NSMCE1Q8WV22 266 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 FAR1Q8WVX9 515 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 KAT2BQ92831 832 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 ZKSCAN4Q969J2 545 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 LENG9Q96B70 501 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 TMCO6Q96DC7 493 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 DAZAP1Q96EP5 407 aaKnown RBP4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 SIPA1Q96FS4 1042 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 BBS4Q96RK4 519 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 CITED2Q99967 270 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 DESI2Q9BSY9 194 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 C2orf40Q9H1Z8 148 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 HRH4Q9H3N8 390 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 PLEKHA4Q9H4M7 779 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 RANGRFQ9HD47 186 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 PLK2Q9NYY3 685 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 SELENONQ9NZV5 590 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 MTRRQ9UBK8 725 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 ANAPC2Q9UJX6 822 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 ACAD8Q9UKU7 415 aa4.03□□□□□ -1.76
TRAPPC13-208ENST00000505553 TARSL2A2RTX5 802 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 FAM157AC9JC47 383 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 MITFO75030 526 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 TPPPO94811 219 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 ATP5BP06576 529 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 TPOP07202 933 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 TUBBP07437 444 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 HNRNPCP07910 306 aaKnown RBP eCLIP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 ATF7P17544 494 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 CPT2P23786 658 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 PON1P27169 355 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 KRT2P35908 639 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 CCT8P50990 548 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 ZBTB16Q05516 673 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 ACSM2AQ08AH3 577 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 ALCAMQ13740 583 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 SNTB1Q13884 538 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 RUNX2Q13950 521 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 ME3Q16798 604 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 KRT24Q2M2I5 525 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 ALG11Q2TAA5 492 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 CST9LP1Q5W188 147 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 PAPD7Q5XG87 772 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 KRT79Q5XKE5 535 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 ACSM2BQ68CK6 577 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 DCLRE1AQ6PJP8 1040 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 SERPINA13PQ6UXR4 307 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 GET4Q7L5D6 327 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC29A4Q7RTT9 530 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 PLPPR4Q7Z2D5 763 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 TBC1D26Q86UD7 250 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 RNF168Q8IYW5 571 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 CCAR2Q8N163 923 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 TMCO5AQ8N6Q1 288 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 GDAP1Q8TB36 358 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 HDAC7Q8WUI4 952 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 FAM162AQ96A26 154 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 CFAP57Q96MR6 1250 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 DGAT2Q96PD7 388 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 SPAG5Q96R06 1193 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 OR2A14Q96R47 310 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 SRSF8Q9BRL6 282 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 CCDC106Q9BWC9 280 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 IFIH1Q9BYX4 1025 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 PLK3Q9H4B4 646 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 CXorf56Q9H5V9 222 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 OPA3Q9H6K4 179 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 DBNDD1Q9H9R9 158 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 WDR35Q9P2L0 1181 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 ANKFY1Q9P2R3 1169 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 CNOT8Q9UFF9 292 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 FBXO4Q9UKT5 387 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC8A2Q9UPR5 921 aa4.02□□□□□ -1.77
TRAPPC13-208ENST00000505553 FAM237AA0A1B0GTK4 181 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 TRBC2A0A5B9 178 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 CBY3A6NI87 242 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 A6NL46 340 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 H7C1Q1 480 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 EBAG9O00559 213 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC7A4O43246 635 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 PAPSS1O43252 624 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 MSI1O43347 362 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 GPC4O75487 556 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 NKX2-2O95096 273 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 FYNP06241 537 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 TGFB3P10600 412 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC14A1Q13336 389 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 GALNT3Q14435 633 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 KPNB1Q14974 876 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 FAM153CQ494X1 144 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 PMS2CLQ68D20 193 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 KCNV1Q6PIU1 500 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 NAPRTQ6XQN6 538 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 TRIM72Q6ZMU5 477 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 PEG10Q86TG7 708 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 WDR5BQ86VZ2 330 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 UNC45BQ8IWX7 931 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 LCORLQ8N3X6 602 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 ARL10Q8N8L6 244 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 Q8NFD4 153 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms