RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 HOXC13P31276 330 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 GATMP50440 423 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 CCL23P55773 120 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 CTXN3Q4LDR2 81 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 SH2D4BQ5SQS7 431 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 ZNF280DQ6N043 979 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 LILRA2Q8N149 483 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 RNF34Q969K3 372 aa17.07■□□□□ 0.32
LIN54-204ENST00000505397 MRPL57Q9BQC6 102 aaKnown RBP17.07■□□□□ 0.32
LIN54-204ENST00000505397 UBE2OQ9C0C9 1292 aaKnown RBP17.07■□□□□ 0.32
LIN54-204ENST00000505397 SDHDO14521 159 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 MAFKO60675 156 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 PARNO95453 639 aaKnown RBP17.06■□□□□ 0.32
LIN54-204ENST00000505397 PSMD8P48556 350 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 PPP2R5DQ14738 602 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 POU6F1Q14863 301 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 RARS2Q5T160 578 aaKnown RBP17.06■□□□□ 0.32
LIN54-204ENST00000505397 CATSPER1Q8NEC5 780 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 DQX1Q8TE96 717 aaKnown RBP17.06■□□□□ 0.32
LIN54-204ENST00000505397 FUBP3Q96I24 572 aaKnown RBP eCLIP17.06■□□□□ 0.32
LIN54-204ENST00000505397 UBAP1Q9NZ09 502 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 MYLKQ15746 1914 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 A0A087X1B8 175 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 SLC1A2P43004 574 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 PKNOX1P55347 436 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 PDCD2Q16342 344 aaPredicted RBP17.06■□□□□ 0.32
LIN54-204ENST00000505397 BTBD8Q5XKL5 378 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 AP1ARQ63HQ0 302 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 CHSY3Q70JA7 882 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 BEND5Q7L4P6 421 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 PIWIL4Q7Z3Z4 852 aaKnown RBP17.06■□□□□ 0.32
LIN54-204ENST00000505397 TXNDC5Q8NBS9 432 aaKnown RBP17.06■□□□□ 0.32
LIN54-204ENST00000505397 PPHLN1Q8NEY8 458 aaKnown RBP17.06■□□□□ 0.32
LIN54-204ENST00000505397 BHLHE22Q8NFJ8 381 aaPredicted RBP17.06■□□□□ 0.32
LIN54-204ENST00000505397 LRGUKQ96M69 825 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 UTP6Q9NYH9 597 aaKnown RBP17.06■□□□□ 0.32
LIN54-204ENST00000505397 NCKIPSDQ9NZQ3 722 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 NDUFA13Q9P0J0 144 aa17.06■□□□□ 0.32
LIN54-204ENST00000505397 TRPC5OSA6NMA1 111 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 MATN3O15232 486 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 ENO3P13929 434 aaPredicted RBP17.05■□□□□ 0.32
LIN54-204ENST00000505397 TAS2R39P59534 338 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 NXNQ6DKJ4 435 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 NAT14Q8WUY8 206 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 USP13Q92995 863 aaPredicted RBP17.05■□□□□ 0.32
LIN54-204ENST00000505397 MARK4Q96L34 752 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 OMDQ99983 421 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 ABCC13Q9NSE7 274 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 CLIC5Q9NZA1 410 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 SLC2A6Q9UGQ3 507 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 PCDHB5Q9Y5E4 795 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 BPTFQ12830 3046 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 TBKBP1A7MCY6 615 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 TMEM233B4DJY2 109 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 DFFAO00273 331 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 TXNDC9O14530 226 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 DYNC1I2Q13409 638 aaKnown RBP17.05■□□□□ 0.32
LIN54-204ENST00000505397 ART3Q13508 389 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 MANEALQ5VSG8 457 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 SLC39A5Q6ZMH5 540 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 ANKRD33Q7Z3H0 272 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 ATPAF2Q8N5M1 289 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 IPMKQ8NFU5 416 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 CEP70Q8NHQ1 597 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 HEXDCQ8WVB3 486 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 FICDQ9BVA6 458 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 ENTPD7Q9NQZ7 604 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 IGSF5Q9NSI5 407 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 MICAL3Q7RTP6 2002 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 STX16-NPEPL1H3BU86 382 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 CFLARO15519 480 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 RTN3O95197 1032 aaPredicted RBP17.05■□□□□ 0.32
LIN54-204ENST00000505397 CRTAMO95727 393 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 ATP5F1P24539 256 aaPredicted RBP17.05■□□□□ 0.32
LIN54-204ENST00000505397 MSX2P35548 267 aaPredicted RBP17.05■□□□□ 0.32
LIN54-204ENST00000505397 SLC11A1P49279 550 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 GEMP55040 296 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 POU4F1Q01851 419 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 CREB5Q02930 508 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 ELAVL2Q12926 359 aaKnown RBP17.05■□□□□ 0.32
LIN54-204ENST00000505397 LSAMPQ13449 338 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 CNGA3Q16281 694 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 KIAA0930Q6ICG6 404 aaPredicted RBP17.05■□□□□ 0.32
LIN54-204ENST00000505397 RANBP10Q6VN20 620 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 DEFB128Q7Z7B8 93 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 SATL1Q86VE3 508 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 SPATA6LQ8N4H0 392 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 KLHL32Q96NJ5 620 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 PPP1R2P1Q96PQ5 205 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 Q9H521 79 aa17.05■□□□□ 0.32
LIN54-204ENST00000505397 ANKRD33BA6NCL7 494 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 OR6C75A6NL08 312 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 CPB1P15086 417 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 PMLP29590 882 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 HTR7P34969 479 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 CD151P48509 253 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 RWDD4Q6NW29 188 aaKnown RBP17.04■□□□□ 0.32
LIN54-204ENST00000505397 FUT10Q6P4F1 479 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 CNSTQ6PJW8 725 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 TRIM67Q6ZTA4 783 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms