RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 SPATS2LQ9NUQ6 558 aaKnown RBP3.37□□□□□ -1.87
RFC1-209ENST00000504974 NCKIPSDQ9NZQ3 722 aa3.37□□□□□ -1.87
RFC1-209ENST00000504974 FAM96BQ9Y3D0 163 aa3.37□□□□□ -1.87
RFC1-209ENST00000504974 ADGRF5Q8IZF2 1346 aa3.37□□□□□ -1.87
RFC1-209ENST00000504974 MAST1Q9Y2H9 1570 aa3.37□□□□□ -1.87
RFC1-209ENST00000504974 MROH2AA6NES4 1674 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 FAM135BQ49AJ0 1406 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 MIA2Q96PC5 1412 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 MBD5Q9P267 1494 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 FAM135AQ9P2D6 1515 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 TTC36A6NLP5 189 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 HSPB2A8KAH6 182 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 KDM4EB2RXH2 506 aaPredicted RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 EIF3CLB5ME19 914 aaKnown RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 IFNL4K9M1U5 179 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 LDLRAD4O15165 306 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 BCAT2O15382 392 aaPredicted RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 SEC31AO94979 1220 aaKnown RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 IFNA2P01563 188 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 KLKB1P03952 638 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 CYP1A2P05177 515 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 MYZAPP0CAP1 466 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 PCNAP12004 261 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 ARL1P40616 181 aaPredicted RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 GNAQP50148 359 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 EIF3BP55884 814 aaKnown RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 P2RX3P56373 397 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 CLDN2P57739 230 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 ITGADQ13349 1161 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 SIM2Q14190 667 aaPredicted RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 ARHGEF6Q15052 776 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 HSPB2Q16082 182 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 Q5PR19 223 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 PRAMEF19Q5SWL8 479 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 WDR78Q5VTH9 848 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 ATG9BQ674R7 924 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 ZNF425Q6IV72 752 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 CPLX2Q6PUV4 134 aaKnown RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 C1QL2Q7Z5L3 287 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 PIP4P1Q86T03 277 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 TBC1D1Q86TI0 1168 aaPredicted RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 DENND6AQ8IWF6 608 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 ZDHHC23Q8IYP9 409 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 ZCCHC9Q8N567 271 aaKnown RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 MIGA1Q8NAN2 632 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 C7orf57Q8NEG2 295 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 ENGASEQ8NFI3 743 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 GJC3Q8NFK1 279 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 GABPB2Q8TAK5 448 aaPredicted RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 ETNPPLQ8TBG4 499 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 TMEM170AQ8WVE7 144 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 SMG7Q92540 1137 aaKnown RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 TMEM18Q96B42 140 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 APOLD1Q96LR9 279 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 C7orf26Q96N11 449 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 CDT1Q9H211 546 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 KLHL31Q9H511 634 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 CATSPERBQ9H7T0 1116 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 KRCC1Q9NPI7 259 aaPredicted RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 ZBTB40Q9NUA8 1239 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 MKLN1Q9UL63 735 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 CARD8Q9Y2G2 431 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 INSL5Q9Y5Q6 135 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 CEP170BQ9Y4F5 1589 aaPredicted RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 SPAG9O60271 1321 aaKnown RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 PTPN23Q9H3S7 1636 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 ALKQ9UM73 1620 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.36□□□□□ -1.87
RFC1-209ENST00000504974 JCADQ9P266 1359 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 RTEL1-TNFRSF6BF6WH68 1400 aa3.36□□□□□ -1.87
RFC1-209ENST00000504974 NPHP4O75161 1426 aaPredicted RBP3.36□□□□□ -1.87
RFC1-209ENST00000504974 A2MP01023 1474 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 LRRC7Q96NW7 1537 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 EIF2AK4Q9P2K8 1649 aaKnown RBP3.35□□□□□ -1.87
RFC1-209ENST00000504974 LY6G6EA0A0G2JKS1 128 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.35□□□□□ -1.87
RFC1-209ENST00000504974 RPS10-NUDT3A0A1W2PQS6 291 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 GAGE12JA6NER3 117 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 CBY3A6NI87 242 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 LRRC53A6NM62 1247 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 KLRF2D3W0D1 207 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 EBAG9O00559 213 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 LIASO43766 372 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 HNRNPCL1O60812 293 aaKnown RBP3.35□□□□□ -1.87
RFC1-209ENST00000504974 MOSPD3O75425 235 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 RGS11O94810 467 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 BAIAP3O94812 1187 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 IRF1P10914 325 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 PTPN2P17706 415 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 TTKP33981 857 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 PTGER1P34995 402 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 RGS2P41220 211 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 POLD2P49005 469 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 CENPAP49450 140 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 RPS3AP61247 264 aaKnown RBP3.35□□□□□ -1.87
RFC1-209ENST00000504974 GRIK3Q13003 919 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 HIST2H2ACQ16777 129 aaPredicted RBP3.35□□□□□ -1.87
RFC1-209ENST00000504974 DCAF12L2Q5VW00 463 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 NCAPH2Q6IBW4 605 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 INO80CQ6PI98 192 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms