RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 HIVEP3Q5T1R4 2406 aa6.09□□□□□ -1.43
GYPB-204ENST00000504951 ZFC3H1O60293 1989 aaKnown RBP6.09□□□□□ -1.43
GYPB-204ENST00000504951 IGLV3-10A0A075B6K4 115 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 ILVBLA1L0T0 632 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 CFAP69A5D8W1 941 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 MKRN2OSH3BPM6 223 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 B4GAT1O43505 415 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 SMAD6O43541 496 aaKnown RBP6.08□□□□□ -1.44
GYPB-204ENST00000504951 ZMPSTE24O75844 475 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 ZNF202O95125 648 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 RASGRP1O95267 797 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 TRUB2O95900 331 aaKnown RBP6.08□□□□□ -1.44
GYPB-204ENST00000504951 HSP90AA1P07900 732 aaKnown RBP6.08□□□□□ -1.44
GYPB-204ENST00000504951 KRT7P08729 469 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 HTR1BP28222 390 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 GPD2P43304 727 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 LIMK2P53671 638 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 MAPK10P53779 464 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 YWHAZP63104 245 aaKnown RBP6.08□□□□□ -1.44
GYPB-204ENST00000504951 CDC20Q12834 499 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 C1orf61Q13536 156 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 AUHQ13825 339 aaKnown RBP6.08□□□□□ -1.44
GYPB-204ENST00000504951 C16orf72Q14CZ0 275 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 C14orf28Q4W4Y0 310 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 ZNF805Q5CZA5 627 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 CARD16Q5EG05 197 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 DCAF17Q5H9S7 520 aaPredicted RBP6.08□□□□□ -1.44
GYPB-204ENST00000504951 TCERG1LQ5VWI1 586 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 C1QL3Q5VWW1 255 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 SYPL2Q5VXT5 272 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 PAPD7Q5XG87 772 aaKnown RBP6.08□□□□□ -1.44
GYPB-204ENST00000504951 ANKRD40Q6AI12 368 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 RETSATQ6NUM9 610 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 TMPRSS9Q7Z410 1059 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 TAC4Q86UU9 113 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 HPS6Q86YV9 775 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 APLFQ8IW19 511 aaPredicted RBP6.08□□□□□ -1.44
GYPB-204ENST00000504951 HSCBQ8IWL3 235 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 ZNF683Q8IZ20 524 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 ATP11CQ8NB49 1132 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 TP53I13Q8NBR0 393 aaPredicted RBP6.08□□□□□ -1.44
GYPB-204ENST00000504951 CHST14Q8NCH0 376 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 AGBL5Q8NDL9 886 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 OR4D9Q8NGE8 314 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 OR52K2Q8NGK3 314 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 PCDH19Q8TAB3 1148 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 SLC35C1Q96A29 364 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 VOPP1Q96AW1 172 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 PPP1R13BQ96KQ4 1090 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 OSBPL1AQ9BXW6 950 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 SEMA6CQ9H3T2 930 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 FBXO8Q9NRD0 319 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 LRIT1Q9P2V4 623 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 DKK3Q9UBP4 350 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 GULP1Q9UBP9 304 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 VPS51Q9UID3 782 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 SRPK3Q9UPE1 567 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 DOLKQ9UPQ8 538 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 CNTN6Q9UQ52 1028 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 PCDHGB7Q9Y5F8 929 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 KCNMB2Q9Y691 235 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 CRYBG3Q68DQ2 2970 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 OTOGQ6ZRI0 2925 aa6.08□□□□□ -1.44
GYPB-204ENST00000504951 F8P00451 2351 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 IGHV5-10-1A0A0J9YXX1 117 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 CDC14CA4D256 554 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 C16orf96A6NNT2 1141 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 EFCAB7A8K855 629 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 RNF103O00237 685 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 CETN3O15182 167 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 NKX2-8O15522 239 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 RAD1O60671 282 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 SEMA7AO75326 666 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 TM7SF2O76062 418 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 TNFP01375 233 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 EPB41P11171 864 aaKnown RBP6.07□□□□□ -1.44
GYPB-204ENST00000504951 CCL4P13236 92 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 CTSEP14091 401 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 BRD2P25440 801 aaKnown RBP6.07□□□□□ -1.44
GYPB-204ENST00000504951 MAN1A1P33908 653 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 IGFALSP35858 605 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 MLLT10P55197 1068 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 PITX1P78337 314 aaPredicted RBP6.07□□□□□ -1.44
GYPB-204ENST00000504951 KRT85P78386 507 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 PEX6Q13608 980 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 ARHGEF7Q14155 803 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 ALG11Q2TAA5 492 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 TMEM52BQ4KMG9 183 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 DCAF12Q5T6F0 453 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 C22orf39Q6P5X5 142 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 TMEM270Q6UE05 265 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 NLGN4XQ8N0W4 816 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 BMPERQ8N8U9 685 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 NLGN4YQ8NFZ3 816 aaPredicted RBP6.07□□□□□ -1.44
GYPB-204ENST00000504951 LMO3Q8TAP4 145 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 CPT1CQ8TCG5 803 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 CCDC47Q96A33 483 aaKnown RBP6.07□□□□□ -1.44
GYPB-204ENST00000504951 KIAA1143Q96AT1 154 aaPredicted RBP6.07□□□□□ -1.44
GYPB-204ENST00000504951 MOCOSQ96EN8 888 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 RPRD1AQ96P16 312 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms