RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 GBE1Q04446 702 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 NSUN2Q08J23 767 aaKnown RBP eCLIP14.35□□□□□ -0.11
HOXC9-202ENST00000504557 FZD2Q14332 565 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 LLGL1Q15334 1064 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 TMEM52BQ4KMG9 183 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 GAS2L3Q86XJ1 694 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 CCNYQ8ND76 341 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.35□□□□□ -0.11
HOXC9-202ENST00000504557 ADAMTS14Q8WXS8 1223 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 RNF25Q96BH1 459 aaPredicted RBP14.35□□□□□ -0.11
HOXC9-202ENST00000504557 CENPTQ96BT3 561 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 ZNF670Q9BS34 389 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 ANP32EQ9BTT0 268 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 GOLPH3Q9H4A6 298 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 LCMT1Q9UIC8 334 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 HEY1Q9Y5J3 304 aa14.35□□□□□ -0.11
HOXC9-202ENST00000504557 AKAP13Q12802 2813 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 CEP295Q9C0D2 2601 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 SPTY2D1-AS1A0A0U1RR47 76 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.34□□□□□ -0.11
HOXC9-202ENST00000504557 TRIM38O00635 465 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 SIGLEC6O43699 453 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 PIAS2O75928 621 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 CPP00450 1065 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 ELFN1P0C7U0 828 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 JUNDP17535 347 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 MAN1A1P33908 653 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 DYNLT1P63172 113 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 DAB2P98082 770 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 GALNT2Q10471 571 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 LRRC14Q15048 493 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 ACOX1Q15067 660 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 PAFAH1B3Q15102 231 aaKnown RBP14.34□□□□□ -0.11
HOXC9-202ENST00000504557 PTPRRQ15256 657 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 B4GALNT4Q76KP1 1039 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 KANSL1Q7Z3B3 1105 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 RD3Q7Z3Z2 195 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 ZSCAN30Q86W11 494 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 PARGQ86W56 976 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 RFX6Q8HWS3 928 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 RBFAQ8N0V3 343 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 SLC25A45Q8N413 288 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 PQLC3Q8N755 202 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 TP53I13Q8NBR0 393 aaPredicted RBP14.34□□□□□ -0.11
HOXC9-202ENST00000504557 DENND6BQ8NEG7 585 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 FAM71BQ8TC56 605 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 LMX1AQ8TE12 382 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 LENG8Q96PV6 779 aaPredicted RBP14.34□□□□□ -0.11
HOXC9-202ENST00000504557 NUDCD1Q96RS6 583 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 SEMA3CQ99985 751 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 MAK16Q9BXY0 300 aaKnown RBP14.34□□□□□ -0.11
HOXC9-202ENST00000504557 NEUROG3Q9Y4Z2 214 aa14.34□□□□□ -0.11
HOXC9-202ENST00000504557 GOLGA6CA6NDK9 693 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 GOLGA6BA6NDN3 693 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 SOWAHDA6NJG2 315 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 H3BM21 787 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 GOLGA6DP0CG33 693 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 CTPS1P17812 591 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 COMTP21964 271 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 HSPA9P38646 679 aaKnown RBP14.33□□□□□ -0.12
HOXC9-202ENST00000504557 ARHGAP25P42331 645 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 SUOXP51687 545 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 PFN3P60673 137 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 POLR2LP62875 67 aaKnown RBP14.33□□□□□ -0.12
HOXC9-202ENST00000504557 DSC2Q02487 901 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 TRAF2Q12933 501 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 C1orf61Q13536 156 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 SPA17Q15506 151 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 IFI16Q16666 785 aaKnown RBP14.33□□□□□ -0.12
HOXC9-202ENST00000504557 WSCD2Q2TBF2 565 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 FAXCQ5TGI0 409 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 NPNTQ6UXI9 565 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 DCP2Q8IU60 420 aaKnown RBP14.33□□□□□ -0.12
HOXC9-202ENST00000504557 FAM174AQ8TBP5 190 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 HCAR2Q8TDS4 363 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 ZNF830Q96NB3 372 aaPredicted RBP14.33□□□□□ -0.12
HOXC9-202ENST00000504557 RNF157Q96PX1 679 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 MGME1Q9BQP7 344 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 TCEAL2Q9H3H9 227 aaPredicted RBP14.33□□□□□ -0.12
HOXC9-202ENST00000504557 RBM22Q9NW64 420 aaKnown RBP eCLIP14.33□□□□□ -0.12
HOXC9-202ENST00000504557 GOLGA6AQ9NYA3 693 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 B4GALT6Q9UBX8 382 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 KLF15Q9UIH9 416 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 MSRB2Q9Y3D2 182 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 OR1A2Q9Y585 309 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 PCDHA13Q9Y5I0 950 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 KNTC1P50748 2209 aa14.33□□□□□ -0.12
HOXC9-202ENST00000504557 A0A0U1RQS6 177 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 TRAFD1O14545 582 aaPredicted RBP14.32□□□□□ -0.12
HOXC9-202ENST00000504557 APOL1O14791 398 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 RFPL3O75679 317 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 RECQL5O94762 991 aaPredicted RBP14.32□□□□□ -0.12
HOXC9-202ENST00000504557 CR2P20023 1033 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 CYLC1P35663 651 aaPredicted RBP14.32□□□□□ -0.12
HOXC9-202ENST00000504557 HNRNPKP61978 463 aaKnown RBP eCLIP14.32□□□□□ -0.126e-6■■■■□ 20.3
HOXC9-202ENST00000504557 SLC10A2Q12908 348 aaPredicted RBP14.32□□□□□ -0.12
HOXC9-202ENST00000504557 RALGDSQ12967 914 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 EIF2B5Q13144 721 aaKnown RBP14.32□□□□□ -0.12
HOXC9-202ENST00000504557 PTK2BQ14289 1009 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms