RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NME4O00746 187 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 PMPCBO75439 489 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 BMP10O95393 424 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 IQCF3P0C7M6 154 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 TXNP10599 105 aaKnown RBP7.67□□□□□ -1.18
NEDD9-208ENST00000504387 PRKACGP22612 351 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 NDUFV1P49821 464 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 SULT1E1P49888 294 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 PRKAA2P54646 552 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 STX5Q13190 355 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 DPYSQ14117 519 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 LAPTM4AQ15012 233 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 TIGD2Q4W5G0 525 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF789Q5FWF6 425 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 FAM72AQ5TYM5 149 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 FAM72DQ6L9T8 149 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 ESRP1Q6NXG1 681 aaKnown RBP7.67□□□□□ -1.18
NEDD9-208ENST00000504387 CRTC3Q6UUV7 619 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 BNIPLQ7Z465 357 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 FAM72BQ86X60 149 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 LGI2Q8N0V4 545 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 OR2T34Q8NGX1 318 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 OR2T3Q8NH03 318 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 HEXDCQ8WVB3 486 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 RSPH1Q8WYR4 309 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 KHSRPQ92945 711 aaKnown RBP eCLIP7.67□□□□□ -1.187e-7■□□□□ 10.6
NEDD9-208ENST00000504387 GLMNQ92990 594 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 ESAMQ96AP7 390 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 FEM1CQ96JP0 617 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 SPATA17Q96L03 361 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 OSBPL2Q9H1P3 480 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 LHX5Q9H2C1 402 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 PDGFCQ9NRA1 345 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 ACOT9Q9Y305 439 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 NOX1Q9Y5S8 564 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 SQORQ9Y6N5 450 aa7.67□□□□□ -1.18
NEDD9-208ENST00000504387 LY75O60449 1722 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 PTPRFP10586 1907 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CLDN5O00501 218 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 DYNC1LI2O43237 492 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 AQP9O43315 295 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ONECUT3O60422 494 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 TSPAN3O60637 253 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CILPO75339 1184 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ENDOD1O94919 500 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SIX3O95343 332 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 PGK1P00558 417 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ATP5BP06576 529 aaKnown RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 PFKMP08237 780 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 LINC00032P0C843 101 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 HSPA8P11142 646 aaKnown RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 NFKB1P19838 968 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 TPSB2P20231 275 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 AGXTP21549 392 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 PSMA4P25789 261 aaKnown RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 HOXD11P31277 338 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CDH5P33151 784 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SHMT2P34897 504 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 HPCAL1P37235 193 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 TAS2R39P59534 338 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 IFITM3Q01628 133 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 TPSAB1Q15661 275 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SCN9AQ15858 1988 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 MEP1AQ16819 746 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 RBM20Q5T481 1227 aaKnown RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 PDE4DIPQ5VU43 2346 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 THOC7Q6I9Y2 204 aaKnown RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ABRAXAS1Q6UWZ7 409 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SLCO6A1Q86UG4 719 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ITIH5Q86UX2 942 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 FAM83AQ86UY5 434 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 DEFB106AQ8N104 65 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SPPL2BQ8TCT7 592 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CEP44Q9C0F1 390 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SIK2Q9H0K1 926 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 LRRC40Q9H9A6 602 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ELP3Q9H9T3 547 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SMURF2Q9HAU4 748 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 DPP3Q9NY33 737 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 HOXC10Q9NYD6 342 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CACNG4Q9UBN1 327 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CPSF3Q9UKF6 684 aaKnown RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF214Q9UL59 606 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ERGIC3Q9Y282 383 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 TTC24A2A3L6 582 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 NCF1BA6NI72 391 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 NCF1CA8MVU1 366 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SPATA31C2B4DYI2 1134 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 M0QYT0 321 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ALBP02768 609 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF286BP0CG31 522 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SLC35E2BP0CK96 405 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 NCF1P14598 390 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF12P17014 697 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 GGT5P36269 586 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 ARL2P36404 184 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 CHRNA4P43681 627 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 STX1BP61266 288 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 SLC6A3Q01959 620 aa7.66□□□□□ -1.18
NEDD9-208ENST00000504387 OCA2Q04671 838 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms