RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 MRPS18BQ9Y676 258 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 TEX15Q9BXT5 2789 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SDK2Q58EX2 2172 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SPTY2D1-AS1A0A0U1RR47 76 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 LOC100289279A0A1B0GTE1 492 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 NEMP2A6NFY4 417 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 IGLON5A6NGN9 336 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 F5H5T6 163 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 O00370 1275 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 NTN3O00634 580 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 NEMP1O14524 444 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 NKX2-8O15522 239 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SLC7A4O43246 635 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 DIAPH2O60879 1101 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 LEFTY1O75610 366 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 TCEA3O75764 348 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 GRAP2O75791 330 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 CNTN5O94779 1100 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 CLDN1O95832 211 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 LATS1O95835 1130 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 APOEP02649 317 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 PRKCGP05129 697 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 PCCBP05166 539 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 RHOCP08134 193 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 FAM163BP0C2L3 166 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SLFN14P0C7P3 912 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SRCP12931 536 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ADRB3P13945 408 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 DRD2P14416 443 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ITIH2P19823 946 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 RAB6AP20340 208 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 PDCP20941 246 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 FUT4P22083 530 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 OAS2P29728 719 aaKnown RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 CHRNA3P32297 505 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 DCTP40126 519 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 NNMTP40261 264 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 NASPP49321 788 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 MXI1P50539 228 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 THOP1P52888 689 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 MAZP56270 477 aaKnown RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 SLC8A3P57103 927 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ZNF445P59923 1031 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 NUCB2P80303 420 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 CDC20Q12834 499 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 STK4Q13043 487 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 MRPL49Q13405 166 aaKnown RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 PTK2BQ14289 1009 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 STK38Q15208 465 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 IRF4Q15306 451 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 KNOP1Q1ED39 458 aaKnown RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 DEFB109BQ30KR1 87 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 LACTB2Q53H82 288 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 EXOSC6Q5RKV6 272 aaKnown RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 FAXCQ5TGI0 409 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 FAM46CQ5VWP2 391 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SYPL2Q5VXT5 272 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ARHGAP17Q68EM7 881 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 PM20D1Q6GTS8 502 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 CDPF1Q6NVV7 123 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 PMF1Q6P1K2 205 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ERN2Q76MJ5 926 aaKnown RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 TMEM135Q86UB9 458 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ZNF761Q86XN6 746 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 FAM129CQ86XR2 697 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 FAM186BQ8IYM0 893 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 RYBPQ8N488 228 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 SH2D3CQ8N5H7 860 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ARL10Q8N8L6 244 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ANKRD52Q8NB46 1076 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ATP11CQ8NB49 1132 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 C2CD4AQ8NCU7 369 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 OR7D4Q8NG98 312 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SSC4DQ8WTU2 575 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 TFAP2BQ92481 460 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 NAT6Q93015 286 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 RNF34Q969K3 372 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 TSACCQ96A04 125 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 FAM131CQ96AQ9 280 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 CCDC74BQ96LY2 380 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SERPINB11Q96P15 392 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 RPRD1AQ96P16 312 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 PSMB7Q99436 277 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 CTRCQ99895 268 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ZSWIM1Q9BR11 485 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 NUDT22Q9BRQ3 303 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 WRAP53Q9BUR4 548 aaKnown RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 BOCQ9BWV1 1114 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SLC12A9Q9BXP2 914 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 BACH2Q9BYV9 841 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 STRADBQ9C0K7 418 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 LRRN3Q9H3W5 708 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SOX17Q9H6I2 414 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 CYP3A43Q9HB55 503 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 CASS4Q9NQ75 786 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ST7Q9NRC1 585 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 GPR27Q9NS67 375 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 ABCC13Q9NSE7 274 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 KBTBD4Q9NVX7 518 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 TMEM9Q9P0T7 183 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms