RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 FRS2Q8WU20 508 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 MZB1Q8WU39 189 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 BHMTQ93088 406 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 ASIC4Q96FT7 647 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 MRGPRX3Q96LB0 322 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 MCCC1Q96RQ3 725 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-216ENST00000502848 MYADMQ96S97 322 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 SMC6Q96SB8 1091 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 TCF12Q99081 682 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 APOL2Q9BQE5 337 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 TRMT61BQ9BVS5 477 aaKnown RBP9.13□□□□□ -0.95
NR1I3-216ENST00000502848 CENPHQ9H3R5 247 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 POMKQ9H5K3 350 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 HPS4Q9NQG7 708 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 CHRAC1Q9NRG0 131 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 NLE1Q9NVX2 485 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-216ENST00000502848 ELOVL2Q9NXB9 296 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.13□□□□□ -0.95
NR1I3-216ENST00000502848 DKK3Q9UBP4 350 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 ADAM21Q9UKJ8 722 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 CLEC4EQ9ULY5 219 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
NR1I3-216ENST00000502848 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
NR1I3-216ENST00000502848 CAPN8A6NHC0 703 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 ARNTLO00327 626 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 PFDN6O15212 129 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 SMAD6O43541 496 aaKnown RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 LDB2O43679 373 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 RPP40O75818 363 aaKnown RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 MT-CO1P00395 513 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 GLULP15104 373 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 OGNP20774 298 aaKnown RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 CCNFP41002 786 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 CHRNA4P43681 627 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 SLCO1A2P46721 670 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 TRAF2Q12933 501 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 SMAD4Q13485 552 aaKnown RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 HTR4Q13639 388 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 THOC5Q13769 683 aaKnown RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 GRIN2CQ14957 1233 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 DLG2Q15700 870 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 DBN1Q16643 649 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 AARS2Q5JTZ9 985 aaKnown RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 DGKKQ5KSL6 1271 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 TRMT10BQ6PF06 316 aaKnown RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 PACS1Q6VY07 963 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 LEKR1Q6ZMV7 388 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 CAPN12Q6ZSI9 719 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 USP45Q70EL2 814 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 CTAGE3PQ8IX95 158 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 DNASE1L2Q92874 299 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 RMDN1Q96DB5 314 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 MFSD3Q96ES6 412 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 CABS1Q96KC9 395 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 RBBP8Q99708 897 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 CDH19Q9H159 772 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 RHOJQ9H4E5 214 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 CCDC134Q9H6E4 229 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 C20orf96Q9NUD7 363 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 PLA2G4CQ9UP65 541 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
NR1I3-216ENST00000502848 USP15Q9Y4E8 981 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-216ENST00000502848 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 KIAA1549LQ6ZVL6 1849 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 A0A0J9YYE9 177 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 EDDM13A0A1B0GTR0 161 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 K7ERQ8 282 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 ZWINTO95229 277 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 TRBC1P01850 177 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 MT-ND3P03897 115 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 PRNPP04156 253 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 HNRNPLP14866 589 aaKnown RBP eCLIP9.11□□□□□ -0.95
NR1I3-216ENST00000502848 BRAFP15056 766 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 ARSAP15289 507 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 ZNF30P17039 623 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 TPH1P17752 444 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 LPOP22079 712 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-216ENST00000502848 ARNTP27540 789 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 NMBRP28336 390 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 HMGCLP35914 325 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 GRIA2P42262 883 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 MAGEA12P43365 314 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 TNFRSF4P43489 277 aa9.11□□□□□ -0.95
NR1I3-216ENST00000502848 SERPINB8P50452 374 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms