RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 CEP97Q8IW35 865 aa18.35■□□□□ 0.53
LINC00535-201ENST00000501400 OR13C4Q8NGS5 318 aa18.35■□□□□ 0.53
LINC00535-201ENST00000501400 BRSK1Q8TDC3 778 aa18.35■□□□□ 0.53
LINC00535-201ENST00000501400 SH3RF2Q8TEC5 729 aa18.35■□□□□ 0.53
LINC00535-201ENST00000501400 PEX13Q92968 403 aa18.35■□□□□ 0.53
LINC00535-201ENST00000501400 C7orf26Q96N11 449 aa18.35■□□□□ 0.53
LINC00535-201ENST00000501400 COPG2Q9UBF2 871 aa18.35■□□□□ 0.53
LINC00535-201ENST00000501400 PCDHGC4Q9Y5F7 938 aa18.35■□□□□ 0.53
LINC00535-201ENST00000501400 MYOFQ9NZM1 2061 aa18.35■□□□□ 0.53
LINC00535-201ENST00000501400 UBOX5O94941 541 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 RHOP08100 348 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 AVPR1AP37288 418 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 LMAN2Q12907 356 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 MPPE1Q53F39 396 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 MPP7Q5T2T1 576 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 RBM20Q5T481 1227 aaKnown RBP18.34■□□□□ 0.53
LINC00535-201ENST00000501400 FYB2Q5VWT5 728 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 NCEH1Q6PIU2 408 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 TPGS1Q6ZTW0 290 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 PTAR1Q7Z6K3 402 aaPredicted RBP18.34■□□□□ 0.53
LINC00535-201ENST00000501400 CMTM8Q8IZV2 173 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 CENPLQ8N0S6 344 aaPredicted RBP18.34■□□□□ 0.53
LINC00535-201ENST00000501400 CALML6Q8TD86 181 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 TBATAQ96M53 351 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 SLC12A4Q9UP95 1085 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 RAI2Q9Y5P3 530 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 USH1CQ9Y6N9 552 aa18.34■□□□□ 0.53
LINC00535-201ENST00000501400 GRXCR1A8MXD5 290 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 K7ERQ8 282 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 CLASP2O75122 1294 aaKnown RBP18.33■□□□□ 0.53
LINC00535-201ENST00000501400 TGDSO95455 350 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 TROVE2P10155 538 aaKnown RBP eCLIP18.33■□□□□ 0.53
LINC00535-201ENST00000501400 SAT1P21673 171 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 CES1P23141 567 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 HOXA9P31269 272 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 LEPRP48357 1165 aaKnown RBP18.33■□□□□ 0.53
LINC00535-201ENST00000501400 ZNF140P52738 457 aaPredicted RBP18.33■□□□□ 0.53
LINC00535-201ENST00000501400 CCDC153Q494R4 210 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 GALNTL6Q49A17 601 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 ATG16L1Q676U5 607 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 GALNT7Q86SF2 657 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 C10orf107Q8IVU9 208 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 ZNF398Q8TD17 642 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 MICAL1Q8TDZ2 1067 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 SUDS3Q9H7L9 328 aaPredicted RBP18.33■□□□□ 0.53
LINC00535-201ENST00000501400 KCNK13Q9HB14 408 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 RIMKLBQ9ULI2 386 aa18.33■□□□□ 0.53
LINC00535-201ENST00000501400 ARIH1Q9Y4X5 557 aaPredicted RBP18.33■□□□□ 0.53
LINC00535-201ENST00000501400 CD70P32970 193 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 LIG3P49916 1009 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 TAS2R39P59534 338 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 RAB10P61026 200 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 PRAMEP78395 509 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 ATXN7L2Q5T6C5 722 aaPredicted RBP18.33■□□□□ 0.52
LINC00535-201ENST00000501400 ATG14Q6ZNE5 492 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 RAPH1Q70E73 1250 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 RTL10Q7L3V2 364 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 LDB1Q86U70 411 aaPredicted RBP18.33■□□□□ 0.52
LINC00535-201ENST00000501400 TNS4Q8IZW8 715 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 OR6P1Q8NGX9 317 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 LMLNQ96KR4 655 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 TRIM55Q9BYV6 548 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 DCTN4Q9UJW0 460 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 INTS6Q9UL03 887 aaKnown RBP18.33■□□□□ 0.52
LINC00535-201ENST00000501400 ANKRD6Q9Y2G4 727 aa18.33■□□□□ 0.52
LINC00535-201ENST00000501400 TRANK1O15050 2925 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 G3V2L1 256 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 HGSO14964 777 aaPredicted RBP18.32■□□□□ 0.52
LINC00535-201ENST00000501400 RPP40O75818 363 aaKnown RBP18.32■□□□□ 0.52
LINC00535-201ENST00000501400 FSBPO95073 299 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 PRAMEF12O95522 483 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 GOT2P00505 430 aaKnown RBP18.32■□□□□ 0.52
LINC00535-201ENST00000501400 DLDP09622 509 aaKnown RBP18.32■□□□□ 0.52
LINC00535-201ENST00000501400 PTPN2P17706 415 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 SCTRP47872 440 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 POLD2P49005 469 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 RHOAP61586 193 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 NTHL1P78549 312 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 PRSS36Q5K4E3 855 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 SPNS2Q8IVW8 549 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 TMEM151AQ8N4L1 468 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 GPATCH11Q8N954 259 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 LPCAT1Q8NF37 534 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 MDGA1Q8NFP4 955 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 STYXQ8WUJ0 223 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 KCTD4Q8WVF5 259 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 USP13Q92995 863 aaPredicted RBP18.32■□□□□ 0.52
LINC00535-201ENST00000501400 RMDN1Q96DB5 314 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 ELMO2Q96JJ3 720 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 NDNQ99608 321 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 OLFM1Q99784 485 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 OMDQ99983 421 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 C2orf49Q9BVC5 232 aaPredicted RBP18.32■□□□□ 0.52
LINC00535-201ENST00000501400 MTIF3Q9H2K0 278 aaKnown RBP18.32■□□□□ 0.52
LINC00535-201ENST00000501400 NUMBLQ9Y6R0 609 aa18.32■□□□□ 0.52
LINC00535-201ENST00000501400 CCDC162PA2VCL2 907 aa18.31■□□□□ 0.52
LINC00535-201ENST00000501400 SMAD6O43541 496 aaKnown RBP18.31■□□□□ 0.52
LINC00535-201ENST00000501400 SBK3P0C264 359 aa18.31■□□□□ 0.52
LINC00535-201ENST00000501400 DDX6P26196 483 aaKnown RBP eCLIP18.31■□□□□ 0.52
LINC00535-201ENST00000501400 ACTN3Q08043 901 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms