RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 UGT1A5P35504 534 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 STK19P49842 368 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 PPP2CBP62714 309 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 PPP2CAP67775 309 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 NUCB2P80303 420 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 ZBTB16Q05516 673 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CDK5R2Q13319 367 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CDH18Q13634 790 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 DRAP1Q14919 205 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CST6Q15828 149 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 NFIL3Q16649 462 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CDKN3Q16667 212 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 ZCWPW2Q504Y3 356 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 DCAF6Q58WW2 860 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 PITRM1Q5JRX3 1037 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 RNF219Q5W0B1 726 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 NUGGCQ68CJ6 796 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 ANKRD40Q6AI12 368 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 GUSBP11Q6P575 273 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 SND1Q7KZF4 910 aaKnown RBP eCLIP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 RRAGAQ7L523 313 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 EFL1Q7Z2Z2 1120 aaKnown RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 KIAA0907Q7Z7F0 614 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CHSY1Q86X52 802 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CIR1Q86X95 450 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 FAM114A1Q8IWE2 563 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 UNC45BQ8IWX7 931 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 APCDD1Q8J025 514 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 LGI2Q8N0V4 545 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 MMP21Q8N119 569 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 PPM1KQ8N3J5 372 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 TTC39CQ8N584 583 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 HJURPQ8NCD3 748 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 C9orf43Q8TAL5 461 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 EPS8L3Q8TE67 593 aaKnown RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 TMEM174Q8WUU8 243 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 GOLGA1Q92805 767 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 KLK6Q92876 244 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 FAM149B1Q96BN6 582 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 GRAMD1AQ96CP6 724 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 WDR89Q96FK6 387 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 FCRL2Q96LA5 508 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 TSG101Q99816 390 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 RSPH9Q9H1X1 276 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CASS4Q9NQ75 786 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 DKK3Q9UBP4 350 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 USP25Q9UHP3 1055 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 TUBD1Q9UJT1 453 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 ACSL6Q9UKU0 697 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 NAALADL1Q9UQQ1 740 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 K7EM74 188 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 K7ESM1 405 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 AGRPO00253 132 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PLD2O14939 933 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 RNGTTO60942 597 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 VPS4BO75351 444 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PIAS2O75928 621 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ZNF202O95125 648 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 LUC7L3O95232 432 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 MOCS3O95396 460 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 LATS1O95835 1130 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 DDAH2O95865 285 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ASLP04424 464 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 MYL1P05976 194 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 FYNP06241 537 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 SETSIPP0DME0 302 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PDGFRAP16234 1089 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 TACR2P21452 398 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PRCPP42785 496 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 CCR5P51681 352 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PMS1P54277 932 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ZNF445P59923 1031 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 YWHAEP62258 255 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PITX1P78337 314 aaPredicted RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 KRT85P78386 507 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ZNF177Q13360 481 aaPredicted RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 EIF2S3LQ2VIR3 472 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 HNRNPA1L2Q32P51 320 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 EDRF1Q3B7T1 1238 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ACCSLQ4AC99 568 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 CCDC40Q4G0X9 1142 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 HS1BP3Q53T59 392 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 SLC45A4Q5BKX6 768 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ZC3H12AQ5D1E8 599 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 MS4A13Q5J8X5 152 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 C9orf64Q5T6V5 341 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 SYPL2Q5VXT5 272 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ATL3Q6DD88 541 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 LCLAT1Q6UWP7 414 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 USP30Q70CQ3 517 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 B3GNT8Q7Z7M8 397 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 TAC4Q86UU9 113 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ARHGEF19Q8IW93 802 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 FBXO39Q8N4B4 442 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 AADATQ8N5Z0 425 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 UBR7Q8N806 425 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 OR2T34Q8NGX1 318 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 FIBINQ8TAL6 211 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms