RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 JCHAINP01591 159 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 PRKCGP05129 697 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 ITGAVP06756 1048 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 NFKBIAP25963 317 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 NR2C2P49116 596 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 LIG3P49916 1009 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 IL9RQ01113 521 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 SEMG2Q02383 582 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 PPIDQ08752 370 aaKnown RBP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 TFDP3Q5H9I0 405 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 N4BP2L1Q5TBK1 243 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 NPNTQ6UXI9 565 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 GCNT7Q6ZNI0 430 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 ABI3BPQ7Z7G0 1075 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 SPATS2Q86XZ4 545 aaKnown RBP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 DCP2Q8IU60 420 aaKnown RBP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 NDUFAF2Q8N183 169 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 EXD1Q8NHP7 514 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 CAMK1GQ96NX5 476 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 LGMNQ99538 433 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 KLF6Q99612 283 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 DESI2Q9BSY9 194 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 BRD8Q9H0E9 1235 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 PHTF1Q9UMS5 762 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 TTLL3Q9Y4R7 772 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 DOCK9Q9BZ29 2069 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 TRPM6Q9BX84 2022 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 CCDC66A2RUB6 948 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 CFAP69A5D8W1 941 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 POM121BA6NF01 834 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 A8MX80 341 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 KCNK1O00180 336 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 YKT6O15498 198 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 HTRA2O43464 458 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-213ENST00000498495 PCDHGA12O60330 932 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 TGM2P21980 687 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 RABIFP47224 123 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 RXRGP48443 463 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 BNIP3Q12983 259 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 TRIP6Q15654 476 aaKnown RBP12.88□□□□□ -0.35
HSPG2-213ENST00000498495 TAZQ16635 292 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 ARMC12Q5T9G4 340 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 PTAR1Q7Z6K3 402 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-213ENST00000498495 GATAD2AQ86YP4 633 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 SYCE1Q8N0S2 351 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 DENND6BQ8NEG7 585 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 OR13H1Q8NG92 308 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 KRT35Q92764 455 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 P3H4Q92791 437 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 CENPTQ96BT3 561 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 AMFRQ9UKV5 643 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 COQ6Q9Y2Z9 468 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 RAI2Q9Y5P3 530 aa12.88□□□□□ -0.35
HSPG2-213ENST00000498495 SHROOM3Q8TF72 1996 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 PGLSO95336 258 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 CPP00450 1065 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 HLA-DQB2P05538 268 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 ADRB1P08588 477 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 CYP2A6P11509 494 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-213ENST00000498495 C6P13671 934 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 CTNNA1P35221 906 aaKnown RBP12.87□□□□□ -0.35
HSPG2-213ENST00000498495 MMP12P39900 470 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 CETN2P41208 172 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 GRK6P43250 576 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 MARCKSL1P49006 195 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 RWDD2BP57060 319 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 COPS2P61201 443 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 SIM1P81133 766 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-213ENST00000498495 DSC2Q02487 901 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 TRAF2Q12933 501 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 PTK2BQ14289 1009 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 LRRC14Q15048 493 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 SHBQ15464 509 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 INAVAQ3KP66 663 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 LIPIQ6XZB0 460 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 KYAT3Q6YP21 454 aaKnown RBP12.87□□□□□ -0.35
HSPG2-213ENST00000498495 DPPA4Q7L190 304 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 PEX26Q7Z412 305 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 CCDC112Q8NEF3 446 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 SAP25Q8TEE9 199 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 OLFM3Q96PB7 478 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 IL12RB2Q99665 862 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 HEMGNQ9BXL5 484 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 SEPT10Q9P0V9 454 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 SAE1Q9UBE0 346 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-213ENST00000498495 PCOLCE2Q9UKZ9 415 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 CACNA1EQ15878 2313 aa12.87□□□□□ -0.35
HSPG2-213ENST00000498495 ASCC3Q8N3C0 2202 aaKnown RBP12.86□□□□□ -0.35
HSPG2-213ENST00000498495 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 hCG_1818297A0A087WSY0 165 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 A0A0U1RQJ8 604 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 SPAARA0A1B0GVQ0 90 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 GRID2IPA4D2P6 1211 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 ARHGAP6O43182 974 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms