RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 DTWD2Q8NBA8 298 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 HINFPQ9BQA5 517 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 RHOXF2Q9BQY4 288 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 C11orf16Q9NQ32 467 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 FBXL12Q9NXK8 326 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 SCML1Q9UN30 329 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 CYP8B1Q9UNU6 501 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 ITM2BQ9Y287 266 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 PLXNB3Q9ULL4 1909 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 TCRBV7S3A2A0A539 114 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 PRR23AA6NEV1 266 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 CAPN8A6NHC0 703 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 K7ESF4 209 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 FZD6O60353 706 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 SEC31AO94979 1220 aaKnown RBP13.65□□□□□ -0.22
CPNE1-227ENST00000498056 PAPSS2O95340 614 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-227ENST00000498056 AGTP01019 485 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 FGF1P05230 155 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 ALPIP09923 528 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 PIRTP0C851 137 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 HLA-DPA1P20036 260 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 NFKBIAP25963 317 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 ITGA8P53708 1063 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 SEMG2Q02383 582 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 GUCY2DQ02846 1103 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 MTM1Q13496 603 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 SLC1A5Q15758 541 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 SIRPB2Q5JXA9 342 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 PIP5KL1Q5T9C9 394 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 RNASEH2BQ5TBB1 312 aaKnown RBP13.65□□□□□ -0.22
CPNE1-227ENST00000498056 KCTD11Q693B1 232 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 ERAP2Q6P179 960 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-227ENST00000498056 KBTBD6Q86V97 674 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 C1orf210Q8IVY1 113 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 NDUFAF2Q8N183 169 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 DNAAF3Q8N9W5 541 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 OR52K1Q8NGK4 314 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 TRIB3Q96RU7 358 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 ERP44Q9BS26 406 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 USP36Q9P275 1121 aaKnown RBP13.65□□□□□ -0.22
CPNE1-227ENST00000498056 DKK3Q9UBP4 350 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 TPX2Q9ULW0 747 aaKnown RBP13.65□□□□□ -0.22
CPNE1-227ENST00000498056 NCKAP1Q9Y2A7 1128 aa13.65□□□□□ -0.22
CPNE1-227ENST00000498056 ARIH1Q9Y4X5 557 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-227ENST00000498056 FAM47DPA6NHR8 397 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 PRR33A8MZF0 331 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 NEMP1O14524 444 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 NDC80O14777 642 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 AXIN1O15169 862 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 PRLP01236 227 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 ATXN1LP0C7T5 689 aaKnown RBP13.64□□□□□ -0.23
CPNE1-227ENST00000498056 AVPR2P30518 371 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 ADRA1AP35348 466 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 TPMTP51580 245 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 ADPRHP54922 357 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 RPL26P61254 145 aaKnown RBP13.64□□□□□ -0.23
CPNE1-227ENST00000498056 POLR2LP62875 67 aaKnown RBP13.64□□□□□ -0.23
CPNE1-227ENST00000498056 FAM193AP78312 1265 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 CSTF1Q05048 431 aaKnown RBP13.64□□□□□ -0.23
CPNE1-227ENST00000498056 DMWDQ09019 674 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 ELP6Q0PNE2 266 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 SFSWAPQ12872 951 aaKnown RBP13.64□□□□□ -0.23
CPNE1-227ENST00000498056 SEPT6Q14141 434 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 QPCTQ16769 361 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 UGP2Q16851 508 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 GLE1Q53GS7 698 aaKnown RBP13.64□□□□□ -0.23
CPNE1-227ENST00000498056 USP30Q70CQ3 517 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 PCGF5Q86SE9 256 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 LINC00523Q86TU6 105 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 TTC7BQ86TV6 843 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 KLHDC8BQ8IXV7 354 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 CAMKK1Q8N5S9 505 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 BLOC1S5Q8TDH9 187 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 PIH1D2Q8WWB5 315 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 RLN3Q8WXF3 142 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 SPACA7Q96KW9 195 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 SMIM14Q96QK8 99 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 HDAC8Q9BY41 377 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 PCDH12Q9NPG4 1184 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.64□□□□□ -0.23
CPNE1-227ENST00000498056 GGT7Q9UJ14 662 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 FZD4Q9ULV1 537 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 PHTF1Q9UMS5 762 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 RPL26L1Q9UNX3 145 aaKnown RBP13.64□□□□□ -0.23
CPNE1-227ENST00000498056 SHOC2Q9UQ13 582 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 ZNF711Q9Y462 761 aa13.64□□□□□ -0.23
CPNE1-227ENST00000498056 V9GYY5 206 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-227ENST00000498056 ABCA7Q8IZY2 2146 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 A0A0J9YYE9 177 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 LOC285095A0A1B0GVY8 99 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 NPIPB15A6NHN6 443 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-227ENST00000498056 A8MX80 341 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 SLC7A4O43246 635 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 SUN1O94901 812 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 TRBC1P01850 177 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 CYP2A6P11509 494 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-227ENST00000498056 ITIH2P19823 946 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 MMP12P39900 470 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms