RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 CCDC63Q8NA47 563 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 OR13J1Q8NGT2 312 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 FIBINQ8TAL6 211 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 DENND1AQ8TEH3 1009 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 PDCD6IPQ8WUM4 868 aaKnown RBP8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 PTPRN2Q92932 1015 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ATP2A3Q93084 1043 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 PPP2R3CQ969Q6 453 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ISL2Q96A47 359 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ACDQ96AP0 544 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 RMDN1Q96DB5 314 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ALG14Q96F25 216 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 DNAJC1Q96KC8 554 aaKnown RBP8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 CABS1Q96KC9 395 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 GPR22Q99680 433 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 BBS2Q9BXC9 721 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ABCB8Q9NUT2 735 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 POLR3BQ9NW08 1133 aaPredicted RBP8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 TBC1D14Q9P2M4 693 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 GGA2Q9UJY4 613 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 GRID1Q9ULK0 1009 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 CHKBQ9Y259 395 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 OR51B4Q9Y5P0 310 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 RAI2Q9Y5P3 530 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 WNT6Q9Y6F9 365 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ATG2BQ96BY7 2078 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ATXN2Q99700 1313 aaKnown RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 FAM95CA0A1B0GW59 222 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 WDR91A4D1P6 747 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 EBAG9O00559 213 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 CCL22O00626 93 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC9A3R1O14745 358 aaPredicted RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 LDB2O43679 373 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 SIN3BO75182 1162 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 RPP40O75818 363 aaKnown RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 CRTAMO95727 393 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 CD160O95971 181 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 TOP3BO95985 862 aaKnown RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 PENKP01210 267 aaPredicted RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 EPOP01588 193 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 PABPC1P11940 636 aaKnown RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 TYRP14679 529 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 TAC1P20366 129 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 TYK2P29597 1187 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 FOXN2P32314 431 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 HADHAP40939 763 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 ETV4P43268 484 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 MAPK8P45983 427 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 GRIA4P48058 902 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 ARCN1P48444 511 aaKnown RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 SERPINB4P48594 390 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 STK19P49842 368 aaPredicted RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 CLCN5P51795 746 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 ZNF140P52738 457 aaPredicted RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 EPHB1P54762 984 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 TMPRSS15P98073 1019 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 GRM3Q14832 879 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 RARS2Q5T160 578 aaKnown RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 NCEH1Q6PIU2 408 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 FOXR1Q6PIV2 292 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 AFTPHQ6ULP2 937 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 TMC5Q6UXY8 1006 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 RGS9BPQ6ZS82 235 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 CDHR3Q6ZTQ4 885 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 KIAA0408Q6ZU52 694 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 SH2D5Q6ZV89 423 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 MICALCLQ6ZW33 695 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 SRLQ86TD4 932 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 ZC3HC1Q86WB0 502 aaKnown RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC41A1Q8IVJ1 513 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 DENND6AQ8IWF6 608 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 C12orf76Q8N812 135 aaPredicted RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 C2CD4AQ8NCU7 369 aaPredicted RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 ARMC2Q8NEN0 867 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 OR6K2Q8NGY2 324 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 ITFG1Q8TB96 612 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 PEX13Q92968 403 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 OTUB2Q96DC9 234 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 ELMO2Q96JJ3 720 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 TSNARE1Q96NA8 513 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 CDCA3Q99618 268 aaPredicted RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 ADGRE3Q9BY15 652 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC13A1Q9BZW2 595 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 VPS11Q9H270 941 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 C12orf65Q9H3J6 166 aaKnown RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 MFSD1Q9H3U5 465 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 SPHK2Q9NRA0 654 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 FBXO6Q9NRD1 293 aaPredicted RBP8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 CLEC4EQ9ULY5 219 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 ARL5AQ9Y689 179 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 CHD9Q3L8U1 2897 aa8.12□□□□□ -1.11
PDZRN3-212ENST00000498048 TP53BP1Q12888 1972 aaPredicted RBP8.11□□□□□ -1.11
PDZRN3-212ENST00000498048 BPTFQ12830 3046 aa8.11□□□□□ -1.11
PDZRN3-212ENST00000498048 A0A096LPK6 155 aa8.11□□□□□ -1.11
PDZRN3-212ENST00000498048 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.11□□□□□ -1.11
PDZRN3-212ENST00000498048 MROH6A6NGR9 719 aa8.11□□□□□ -1.11
PDZRN3-212ENST00000498048 OR51F1A6NGY5 319 aa8.11□□□□□ -1.11
PDZRN3-212ENST00000498048 EPOPA6NHQ4 379 aa8.11□□□□□ -1.11
PDZRN3-212ENST00000498048 ARHGAP33O14559 1287 aa8.11□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC7A4O43246 635 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms