RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 TEX22C9J3V5 150 aa3□□□□□ -1.93
RIF1-212ENST00000498041 HOXC11O43248 304 aaPredicted RBP3□□□□□ -1.93
RIF1-212ENST00000498041 PRSS2P07478 247 aa3□□□□□ -1.93
RIF1-212ENST00000498041 ZNF8P17098 575 aaPredicted RBP3□□□□□ -1.93
RIF1-212ENST00000498041 PTPN2P17706 415 aa3□□□□□ -1.93
RIF1-212ENST00000498041 MYF6P23409 242 aa3□□□□□ -1.93
RIF1-212ENST00000498041 AMTP48728 403 aa3□□□□□ -1.93
RIF1-212ENST00000498041 CDH15P55291 814 aa3□□□□□ -1.93
RIF1-212ENST00000498041 IRX6P78412 446 aaPredicted RBP3□□□□□ -1.93
RIF1-212ENST00000498041 ADORA2A-AS1P86434 159 aa3□□□□□ -1.93
RIF1-212ENST00000498041 ZXDBP98169 803 aa3□□□□□ -1.93
RIF1-212ENST00000498041 LTBQ06643 244 aa3□□□□□ -1.93
RIF1-212ENST00000498041 ST3GAL1Q11201 340 aa3□□□□□ -1.93
RIF1-212ENST00000498041 CAPSQ13938 189 aa3□□□□□ -1.93
RIF1-212ENST00000498041 MYBPC2Q14324 1141 aa3□□□□□ -1.93
RIF1-212ENST00000498041 ZNF766Q5HY98 468 aa3□□□□□ -1.93
RIF1-212ENST00000498041 UBAP2Q5T6F2 1119 aaKnown RBP3□□□□□ -1.93
RIF1-212ENST00000498041 RUSC1-AS1Q66K80 236 aa3□□□□□ -1.93
RIF1-212ENST00000498041 C8orf82Q6P1X6 216 aaPredicted RBP3□□□□□ -1.93
RIF1-212ENST00000498041 MOB3CQ70IA8 216 aa3□□□□□ -1.93
RIF1-212ENST00000498041 MEPCEQ7L2J0 689 aaKnown RBP3□□□□□ -1.93
RIF1-212ENST00000498041 OR14A16Q8NHC5 309 aa3□□□□□ -1.93
RIF1-212ENST00000498041 ZCCHC10Q8TBK6 192 aa3□□□□□ -1.93
RIF1-212ENST00000498041 ADAMTS14Q8WXS8 1223 aa3□□□□□ -1.93
RIF1-212ENST00000498041 PPM1EQ8WY54 764 aa3□□□□□ -1.93
RIF1-212ENST00000498041 NEUROG1Q92886 237 aa3□□□□□ -1.93
RIF1-212ENST00000498041 OTULINQ96BN8 352 aa3□□□□□ -1.93
RIF1-212ENST00000498041 ELP4Q96EB1 424 aa3□□□□□ -1.93
RIF1-212ENST00000498041 YME1L1Q96TA2 773 aa3□□□□□ -1.93
RIF1-212ENST00000498041 SEZ6LQ9BYH1 1024 aa3□□□□□ -1.93
RIF1-212ENST00000498041 INTS2Q9H0H0 1204 aaKnown RBP3□□□□□ -1.93
RIF1-212ENST00000498041 BEX4Q9NWD9 120 aaPredicted RBP3□□□□□ -1.93
RIF1-212ENST00000498041 ANKRD10Q9NXR5 420 aa3□□□□□ -1.93
RIF1-212ENST00000498041 SAGE1Q9NXZ1 904 aa3□□□□□ -1.93
RIF1-212ENST00000498041 GGA3Q9NZ52 723 aa3□□□□□ -1.93
RIF1-212ENST00000498041 SELENONQ9NZV5 590 aa3□□□□□ -1.93
RIF1-212ENST00000498041 HCN3Q9P1Z3 774 aa3□□□□□ -1.93
RIF1-212ENST00000498041 PEMTQ9UBM1 199 aa3□□□□□ -1.93
RIF1-212ENST00000498041 IQGAP3Q86VI3 1631 aa3□□□□□ -1.93
RIF1-212ENST00000498041 DHX29Q7Z478 1369 aaKnown RBP3□□□□□ -1.93
RIF1-212ENST00000498041 RPRD2Q5VT52 1461 aaKnown RBP2.99□□□□□ -1.93
RIF1-212ENST00000498041 IGHV4-28A0A0C4DH34 117 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 A0A1B0GVM2 712 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 CLEC18AA5D8T8 446 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 GAGE10A6NGK3 116 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 CBY3A6NI87 242 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 PYGLP06737 847 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 ACAA1P09110 424 aaPredicted RBP2.99□□□□□ -1.93
RIF1-212ENST00000498041 CBSLP0DN79 551 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 TFPIP10646 304 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 PCNAP12004 261 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 SLC2A4P14672 509 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 XBP1P17861 261 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 RYKP34925 604 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 CBSP35520 551 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 EFNB1P98172 346 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 CYP4A11Q02928 519 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 TDGQ13569 410 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 RUNX2Q13950 521 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 CAMK1Q14012 370 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 CTTNQ14247 550 aaKnown RBP2.99□□□□□ -1.93
RIF1-212ENST00000498041 SHBQ15464 509 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 KLHL22Q53GT1 634 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 KIAA1161Q6NSJ0 714 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 SLC22A25Q6T423 547 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 TADA2BQ86TJ2 420 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 TBC1D26Q86UD7 250 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 FAM160B2Q86V87 743 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 SPATA2LQ8IUW3 424 aaPredicted RBP2.99□□□□□ -1.93
RIF1-212ENST00000498041 LURAP1LQ8IV03 231 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 MB21D2Q8IYB1 491 aaPredicted RBP2.99□□□□□ -1.93
RIF1-212ENST00000498041 CLEC18CQ8NCF0 446 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 C11orf65Q8NCR3 313 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 GPT2Q8TD30 523 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 HVCN1Q96D96 273 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 MEIS3Q99687 375 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 FUZQ9BT04 418 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 TMEM51Q9NW97 253 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 BABAM1Q9NWV8 329 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 PPP1R14DQ9NXH3 145 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 NDRG3Q9UGV2 375 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 SLC13A4Q9UKG4 626 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 GJD2Q9UKL4 321 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 TBX20Q9UMR3 447 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 PIK3C2BO00750 1634 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 TRPM1Q7Z4N2 1603 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 NOS1P29475 1434 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 SPATA31E1Q6ZUB1 1445 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 POGZQ7Z3K3 1410 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 RGPD8O14715 1765 aaPredicted RBP2.99□□□□□ -1.93
RIF1-212ENST00000498041 KDM5CP41229 1560 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 VWDEQ8N2E2 1590 aa2.99□□□□□ -1.93
RIF1-212ENST00000498041 DUOX2Q9NRD8 1548 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 CAMSAP1Q5T5Y3 1602 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 RNF17Q9BXT8 1623 aaKnown RBP2.98□□□□□ -1.93
RIF1-212ENST00000498041 SLC28A2O43868 658 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 ATP2C2O75185 946 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 URODP06132 367 aa2.98□□□□□ -1.93
RIF1-212ENST00000498041 HNRNPA1P09651 372 aaKnown RBP eCLIP2.98□□□□□ -1.93
RIF1-212ENST00000498041 SRD5A1P18405 259 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms