RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 DCSTAMPQ9H295 470 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 CAB39LQ9H9S4 337 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 MOCS1Q9NZB8 636 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 CD274Q9NZQ7 290 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 OGDHLQ9ULD0 1010 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 COPG1Q9Y678 874 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 NWD1Q149M9 1564 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 MYO5AQ9Y4I1 1855 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 FAM92AA1XBS5 289 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 TMX2-CTNND1H3BSU7 103 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 SOAT2O75908 522 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 GH2P01242 217 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 APOC1P02654 83 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 GPIP06744 558 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 CCNYL3P0C7X3 344 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 BMP4P12644 408 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 GTF2E2P29084 291 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 MAPKAPK2P49137 400 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 MFSD7Q6UXD7 560 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 MFSD2AQ8NA29 543 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 PSD4Q8NDX1 1056 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 RDM1Q8NG50 284 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 OR10T2Q8NGX3 314 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 GIMAP5Q96F15 307 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 ELMO2Q96JJ3 720 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 IER2Q9BTL4 223 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 TASP1Q9H6P5 420 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 CYP4F12Q9HCS2 524 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 PFDN2Q9UHV9 154 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 RAP2CQ9Y3L5 183 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 C10orf71Q711Q0 1435 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 NALCNQ8IZF0 1738 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 HMX3A6NHT5 357 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 STX16-NPEPL1H3BU86 382 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 JRKO75564 520 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 NPPAP01160 153 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 SNRPB2P08579 225 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 ATP6V1B2P21281 511 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 GCAP28676 217 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 GALK2Q01415 458 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 PTP4A2Q12974 167 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 CLEC16AQ2KHT3 1053 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 TFAP2DQ7Z6R9 452 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 MCOLN2Q8IZK6 566 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 TMEM102Q8N9M5 508 aaPredicted RBP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 SLAIN1Q8ND83 568 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 DNAJA4Q8WW22 397 aaPredicted RBP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 OTULINQ96BN8 352 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 ARL5BQ96KC2 179 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 MMP19Q99542 508 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 APBA2Q99767 749 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 DPEP3Q9H4B8 488 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 WDR55Q9H6Y2 383 aaPredicted RBP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 QTRT2Q9H974 415 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 SIX2Q9NPC8 291 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 B3GNT2Q9NY97 397 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 GLS2Q9UI32 602 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 USP21Q9UK80 565 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 SNCAIPQ9Y6H5 919 aa8.23□□□□□ -1.09
CRNKL1-205ENST00000496549 E2F8A0AVK6 867 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 CCDC154A6NI56 674 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 AQP12BA6NM10 295 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 C6orf229H3BNL8 230 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 SOCS2O14508 198 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 MUSKO15146 869 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 ERBB2P04626 1255 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 BMP2P12643 396 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 TNNI1P19237 187 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 RPL10P27635 214 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 DDOSTP39656 456 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 ACOT2P49753 483 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 MAB21L1Q13394 359 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 RFTN1Q14699 578 aaPredicted RBP8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 NPY5RQ15761 445 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 SWI5Q1ZZU3 235 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 FAM98BQ52LJ0 330 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 TOR2AQ5JU69 321 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 FNBP1LQ5T0N5 605 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 PNCKQ6P2M8 343 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 DRICH1Q6PGQ1 229 aaPredicted RBP8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 AQP12AQ8IXF9 295 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 ZDHHC14Q8IZN3 488 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 CPSF7Q8N684 471 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 TTLQ8NG68 377 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 CD101Q93033 1021 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 MAGEB10Q96LZ2 347 aaPredicted RBP8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 BCS1LQ9Y276 419 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 PCDHB12Q9Y5F1 795 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 LAMA4Q16363 1823 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 CYP3A7-CYP3A51PA0A087WV96 503 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 C2orf81A6NN90 581 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 H0YAE9 185 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 KCNN4O15554 427 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 AIREO43918 545 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 CYP3A7P24462 503 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 FAM182BQ5T319 152 aa8.22□□□□□ -1.09
CRNKL1-205ENST00000496549 R3HCC1LQ7Z5L2 792 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms