RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PRR11Q96HE9 360 aaPredicted RBP23.43■■□□□ 1.34
COL27A1-208ENST00000494780 EIF3CQ99613 913 aaKnown RBP23.43■■□□□ 1.34
COL27A1-208ENST00000494780 EDEM3Q9BZQ6 932 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 RP1P56715 2156 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 J3KR12 359 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 CELA2BP08218 269 aaPredicted RBP23.42■■□□□ 1.34
COL27A1-208ENST00000494780 CTSEP14091 401 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 CSNK1DP48730 415 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 SKOR1P84550 965 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 OGDHQ02218 1023 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 ALG11Q2TAA5 492 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 PCSK4Q6UW60 755 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 ENPP7Q6UWV6 458 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 TSACCQ96A04 125 aaPredicted RBP23.42■■□□□ 1.34
COL27A1-208ENST00000494780 CCDC97Q96F63 343 aaPredicted RBP23.42■■□□□ 1.34
COL27A1-208ENST00000494780 APOOQ9BUR5 198 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 CPNE5Q9HCH3 593 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 GULP1Q9UBP9 304 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 AP4E1Q9UPM8 1137 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 SSUH2Q9Y2M2 353 aa23.42■■□□□ 1.34
COL27A1-208ENST00000494780 HELZ2Q9BYK8 2649 aaKnown RBP23.41■■□□□ 1.34
COL27A1-208ENST00000494780 CFAP69A5D8W1 941 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 ARHGAP42A6NI28 874 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 NTN3O00634 580 aaPredicted RBP23.41■■□□□ 1.34
COL27A1-208ENST00000494780 BUB1BO60566 1050 aaPredicted RBP23.41■■□□□ 1.34
COL27A1-208ENST00000494780 MMP12P39900 470 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 LIG3P49916 1009 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 PDX1P52945 283 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 INPP5AQ14642 412 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 STX1AQ16623 288 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 ARHGAP40Q5TG30 622 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 APTXQ7Z2E3 356 aaKnown RBP23.41■■□□□ 1.34
COL27A1-208ENST00000494780 GKN2Q86XP6 184 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 ARL14Q8N4G2 192 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 PCDH19Q8TAB3 1148 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 WBP1Q96G27 269 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 CELF6Q96J87 481 aaKnown RBP23.41■■□□□ 1.34
COL27A1-208ENST00000494780 SLC39A8Q9C0K1 460 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 ATP8A1Q9Y2Q0 1164 aa23.41■■□□□ 1.34
COL27A1-208ENST00000494780 CCDC187A0A096LP49 1063 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 CDRT15L2A8MXV6 281 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 EEF2KO00418 725 aaKnown RBP23.4■■□□□ 1.34
COL27A1-208ENST00000494780 PAPOLAP51003 745 aaKnown RBP23.4■■□□□ 1.34
COL27A1-208ENST00000494780 SRP54P61011 504 aaKnown RBP23.4■■□□□ 1.34
COL27A1-208ENST00000494780 MAMLD1Q13495 774 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 MTM1Q13496 603 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 SRLQ86TD4 932 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 CAMK1DQ8IU85 385 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 ZNF843Q8N446 348 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 KYQ8NBH2 561 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 SNRNP27Q8WVK2 155 aaKnown RBP23.4■■□□□ 1.34
COL27A1-208ENST00000494780 DHX35Q9H5Z1 703 aaKnown RBP23.4■■□□□ 1.34
COL27A1-208ENST00000494780 ATP13A3Q9H7F0 1226 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 SYNDIG1Q9H7V2 258 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 PARVAQ9NVD7 372 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 GPATCH2LQ9NWQ4 482 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 KLQ9UEF7 1012 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 GPR34Q9UPC5 381 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 OR1A2Q9Y585 309 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 LRRK1Q38SD2 2015 aa23.4■■□□□ 1.34
COL27A1-208ENST00000494780 CAPN8A6NHC0 703 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 TNFAIP3P21580 790 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 PSMA2P25787 234 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 SERPINA4P29622 427 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 CFHR1Q03591 330 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 VAC14Q08AM6 782 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 TAF1BQ53T94 588 aaPredicted RBP23.39■■□□□ 1.33
COL27A1-208ENST00000494780 ERMARDQ5T6L9 678 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 FOXR1Q6PIV2 292 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 RD3Q7Z3Z2 195 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 IRF2BP2Q7Z5L9 587 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 CLEC14AQ86T13 490 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 ZSWIM9Q86XI8 627 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 OR6C4Q8NGE1 309 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 LIN37Q96GY3 246 aaPredicted RBP23.39■■□□□ 1.33
COL27A1-208ENST00000494780 WDR92Q96MX6 357 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 SYT11Q9BT88 431 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 HSD3B7Q9H2F3 369 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 TAS2R14Q9NYV8 317 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 SIRPGQ9P1W8 387 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 MYO6Q9UM54 1294 aa23.39■■□□□ 1.33
COL27A1-208ENST00000494780 CASC3O15234 703 aaKnown RBP23.38■■□□□ 1.33
COL27A1-208ENST00000494780 DAPK3O43293 454 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 PALMO75781 387 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 TNFP01375 233 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 PCCBP05166 539 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 RGRP47804 291 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 NCAPHQ15003 741 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 CA9Q16790 459 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 AFMIDQ63HM1 303 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 PLEKHA7Q6IQ23 1121 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 RFX8Q6ZV50 586 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 TSEN2Q8NCE0 465 aaKnown RBP23.38■■□□□ 1.33
COL27A1-208ENST00000494780 CCDC74AQ96AQ1 378 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 DGKBQ9Y6T7 804 aa23.38■■□□□ 1.33
COL27A1-208ENST00000494780 PMS2P1A4D2B8 440 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 TMX2-CTNND1H3BSU7 103 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 TNFSF15O95150 251 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 PRKCGP05129 697 aa23.37■■□□□ 1.33
COL27A1-208ENST00000494780 ITGA2BP08514 1039 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms