RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 IPO11Q9UI26 975 aaKnown RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 KLK13Q9UKR3 277 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 FRYQ5TBA9 3013 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 TMEM8BA6NDV4 472 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 IGLON5A6NGN9 336 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 CES2O00748 559 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 RAD51BO15315 384 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 PIGNO95427 931 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 PAK4O96013 591 aaPredicted RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 ATXN1LP0C7T5 689 aaKnown RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 RGRP47804 291 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 NAP1L1P55209 391 aaKnown RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 CLDN2P57739 230 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 NSUN2Q08J23 767 aaKnown RBP eCLIP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 ELP6Q0PNE2 266 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 HADHQ16836 314 aaKnown RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 TMCO4Q5TGY1 634 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 MEI1Q5TIA1 1274 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 BRAT1Q6PJG6 821 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 ARHGAP36Q6ZRI8 547 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 PTAR1Q7Z6K3 402 aaPredicted RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 TTC7BQ86TV6 843 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 SYCE1Q8N0S2 351 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 LRRC57Q8N9N7 239 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 TSEN2Q8NCE0 465 aaKnown RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 UBE2Q2Q8WVN8 375 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 BMFQ96LC9 184 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 PSKH2Q96QS6 385 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 OSBPL9Q96SU4 736 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 TLR10Q9BXR5 811 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 CALN1Q9BXU9 219 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 SUV39H2Q9H5I1 410 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 CTTNBP2NLQ9P2B4 639 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 V9GYY5 206 aaPredicted RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 ASPMQ8IZT6 3477 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 LRRK1Q38SD2 2015 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 MAP1BP46821 2468 aaKnown RBP13.31□□□□□ -0.28
ERCC3-209ENST00000494464 POM121BA6NF01 834 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 FPGTO14772 594 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 TM7SF2O76062 418 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 PROSCO94903 275 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 PROS1P07225 676 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 TIMP2P16035 220 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 AMPD1P23109 780 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 SERPINA4P29622 427 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 MAN1A1P33908 653 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 HSPA9P38646 679 aaKnown RBP13.31□□□□□ -0.28
ERCC3-209ENST00000494464 RABIFP47224 123 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 RENBPP51606 427 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 ARSEP51690 589 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 CDH6P55285 790 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 AP1S1P61966 158 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 BNIP3Q12983 259 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 SGCGQ13326 291 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 TMEM52BQ4KMG9 183 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 LRRC73Q5JTD7 316 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 SRLQ86TD4 932 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 TP53INP2Q8IXH6 220 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 RHOT2Q8IXI1 618 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 PNPLA1Q8N8W4 532 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 TPCN2Q8NHX9 752 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 CXorf40AQ8TE69 158 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 SPOCK2Q92563 424 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 ECHDC3Q96DC8 303 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 C1QTNF7Q9BXJ2 289 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 ATP13A3Q9H7F0 1226 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 ETNK2Q9NVF9 386 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 RNF14Q9UBS8 474 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 SEPT3Q9UH03 358 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 PCDHGA1Q9Y5H4 931 aa13.31□□□□□ -0.28
ERCC3-209ENST00000494464 WDFY3Q8IZQ1 3526 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 C1QTNF9BB2RNN3 333 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 MUSKO15146 869 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 MTA2O94776 668 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 PEX11BO96011 259 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 C1QTNF9P0C862 333 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 H2AFXP16104 143 aaPredicted RBP13.3□□□□□ -0.28
ERCC3-209ENST00000494464 XPAP23025 273 aaPredicted RBP13.3□□□□□ -0.28
ERCC3-209ENST00000494464 MMP12P39900 470 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 PFN3P60673 137 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 KRT81Q14533 505 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 LBRQ14739 615 aaKnown RBP13.3□□□□□ -0.28
ERCC3-209ENST00000494464 ST3GAL2Q16842 350 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 UGP2Q16851 508 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 TEX35Q5T0J7 233 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 CFAP58Q5T655 872 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 Q6ZSR6 202 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 PARGQ86W56 976 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 CREG2Q8IUH2 290 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 ATPAF2Q8N5M1 289 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 EID2Q8N6I1 236 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 CENPTQ96BT3 561 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 CNDP2Q96KP4 475 aaKnown RBP13.3□□□□□ -0.28
ERCC3-209ENST00000494464 ZNF670Q9BS34 389 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 SHROOM3Q8TF72 1996 aa13.3□□□□□ -0.28
ERCC3-209ENST00000494464 KMT2BQ9UMN6 2715 aaPredicted RBP13.29□□□□□ -0.28
ERCC3-209ENST00000494464 PLXNB3Q9ULL4 1909 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 SPTY2D1-AS1A0A0U1RR47 76 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms