RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 PGLSO95336 258 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 S1PR4O95977 384 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 MPOP05164 745 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 PDHA1P08559 390 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 COL6A2P12110 1019 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 TYRP14679 529 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 PAMP19021 973 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 FOXN2P32314 431 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 CA8P35219 290 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 HMGCLP35914 325 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 SCNN1BP51168 640 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 ARSDP51689 593 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 SEC24CP53992 1094 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 PTPN5P54829 565 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 ITKQ08881 620 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 HYAL1Q12794 435 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 PDE1CQ14123 709 aaPredicted RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 DHCR24Q15392 516 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 PDK4Q16654 411 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 QPCTQ16769 361 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 UGP2Q16851 508 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 SKIDA1Q1XH10 827 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 TYSND1Q2T9J0 566 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 FUT11Q495W5 492 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 FAM78AQ5JUQ0 283 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 LY6G5CQ5SRR4 150 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 COL13A1Q5TAT6 717 aaPredicted RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 PPP2R2DQ66LE6 453 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 FSTL4Q6MZW2 842 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 NEPROQ6NW34 567 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 ANKRD54Q6NXT1 300 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 KYAT3Q6YP21 454 aaKnown RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 LEKR1Q6ZMV7 388 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 STRA8Q7Z7C7 330 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 RBM23Q86U06 439 aaKnown RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 CILP2Q8IUL8 1156 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 MFSD6LQ8IWD5 586 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 C4orf33Q8N1A6 199 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 CBARPQ8N350 705 aaPredicted RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 PHTF2Q8N3S3 785 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 PCDH20Q8N6Y1 951 aaKnown RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 C12orf76Q8N812 135 aaPredicted RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 MDGA1Q8NFP4 955 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 RAB3IL1Q8TBN0 382 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 CALML6Q8TD86 181 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 DTX3LQ8TDB6 740 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 TCP10LQ8TDR4 215 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 HCAR2Q8TDS4 363 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 FGF13Q92913 245 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 SMARCD2Q92925 531 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 E2F7Q96AV8 911 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 EID2BQ96D98 161 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 MYO19Q96H55 970 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 CDKN2AIPNLQ96HQ2 116 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 CABS1Q96KC9 395 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 MRGPRX3Q96LB0 322 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 TUBGCP5Q96RT8 1024 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 SRPK1Q96SB4 655 aaKnown RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 FAM167BQ9BTA0 163 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 C1QTNF1Q9BXJ1 281 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 SLC28A3Q9HAS3 691 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 C20orf96Q9NUD7 363 aaPredicted RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 HACD3Q9P035 362 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 CLEC1BQ9P126 229 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 SIRPGQ9P1W8 387 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 ZFATQ9P243 1243 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 DCDC2Q9UHG0 476 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 GGT7Q9UJ14 662 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 VPS28Q9UK41 221 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 EMCNQ9ULC0 261 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 MTO1Q9Y2Z2 717 aaKnown RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 SPO11Q9Y5K1 396 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 RAI2Q9Y5P3 530 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 RANBP2P49792 3224 aaKnown RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 NUP210Q8TEM1 1887 aaPredicted RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 KIF26AQ9ULI4 1882 aaPredicted RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 A0A1W2PQ67 120 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 TSPAN11A1L157 253 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 TARM1B6A8C7 271 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 SPAG7O75391 227 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 NEBLO76041 1014 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 POP4O95707 220 aaKnown RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 CYP17A1P05093 508 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 PABPC1P11940 636 aaKnown RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 OGNP20774 298 aaKnown RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 CA4P22748 312 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 SLC26A3P40879 764 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 GRIA4P48058 902 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 CCT5P48643 541 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 RGS19P49795 217 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 SUOXP51687 545 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 ADARP55265 1226 aaKnown RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 XIAPP98170 497 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 PDE1BQ01064 536 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 TIAL1Q01085 375 aaKnown RBP eCLIP6.82□□□□□ -1.32
MSH5-217ENST00000494458 IL9RQ01113 521 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 CBX2Q14781 532 aaPredicted RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 GRM3Q14832 879 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 PCSK7Q16549 785 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 PTPRNQ16849 979 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms