RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 XKR6Q5GH73 641 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 OGFRL1Q5TC84 451 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-221ENST00000493795 AAGABQ6PD74 315 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 RGL4Q8IZJ4 473 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 OR8H3Q8N146 312 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 PTGR2Q8N8N7 351 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-221ENST00000493795 HASPINQ8TF76 798 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF471Q9BX82 626 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-221ENST00000493795 GPSM3Q9Y4H4 160 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 KANTRA0A1W2PQU2 76 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 SNAP23O00161 211 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 AKAP8O43823 692 aaKnown RBP7.9□□□□□ -1.15
BRCA1-221ENST00000493795 NUAK1O60285 661 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 ZBTB11O95625 1053 aaPredicted RBP7.9□□□□□ -1.15
BRCA1-221ENST00000493795 BPNT1O95861 308 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 RAB27AP51159 221 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 MYL6P60660 151 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 TBC1D25Q3MII6 688 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 SBK1Q52WX2 424 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 EGFLAMQ63HQ2 1017 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 TUBA3EQ6PEY2 450 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 AFTPHQ6ULP2 937 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 ANKFN1Q8N957 763 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 HM13Q8TCT9 377 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 CELF1Q92879 486 aaKnown RBP7.9□□□□□ -1.15
BRCA1-221ENST00000493795 KLHL5Q96PQ7 755 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 ZNF350Q9GZX5 532 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 ATXN3LQ9H3M9 355 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 SEMA3GQ9NS98 782 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 CUEDC1Q9NWM3 386 aaPredicted RBP7.9□□□□□ -1.15
BRCA1-221ENST00000493795 HACL1Q9UJ83 578 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 KCNIP3Q9Y2W7 256 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.15
BRCA1-221ENST00000493795 DHRS12A0PJE2 317 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ZSCAN5BA6NJL1 495 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 FAM86B2P0C5J1 330 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SRCP12931 536 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 NR4A1P22736 598 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CTSKP43235 329 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PTDSS1P48651 473 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PITPNAQ00169 270 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SLC25A3Q00325 362 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ZNF268Q14587 947 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 MPPE1Q53F39 396 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PCID2Q5JVF3 399 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 GRHL2Q6ISB3 625 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CES3Q6UWW8 571 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 DGLUCYQ7Z3D6 616 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 GPR180Q86V85 440 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SLC41A1Q8IVJ1 513 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 EDEM1Q92611 657 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 HIST1H2AAQ96QV6 131 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PANX1Q96RD7 426 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 TIMMDC1Q9NPL8 285 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 MAGEL2Q9UJ55 1249 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ALG5Q9Y673 324 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 RPTORQ8N122 1335 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ORC5O43913 435 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 KLRC2P26717 231 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 RBM34P42696 430 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 DEFA5Q01523 94 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 TSGA10IPQ3SY00 556 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 FBXO47Q5MNV8 452 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 OVOS1Q6IE37 1185 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 POTEHQ6S545 545 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SNIP1Q8TAD8 396 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 NAT14Q8WUY8 206 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ZKSCAN4Q969J2 545 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ZNF285Q96NJ3 590 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 MFSD1Q9H3U5 465 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 AASSQ9UDR5 926 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 FBXO9Q9UK97 447 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 DNPEPQ9ULA0 475 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 RAB23Q9ULC3 237 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ABCG2Q9UNQ0 655 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 MRPS33Q9Y291 106 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CFAP43Q8NDM7 1665 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SLC30A4O14863 429 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 OTCP00480 354 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 MTHFD1P11586 935 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 MECP2P51608 486 aaKnown RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CLCN5P51795 746 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SLC7A2P52569 658 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PARP6Q2NL67 630 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 GPRIN3Q6ZVF9 776 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 DET1Q7L5Y6 550 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SLC47A2Q86VL8 602 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SNX33Q8WV41 574 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 BARX2Q9UMQ3 279 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 MAN2B2Q9Y2E5 1009 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ARAP3Q8WWN8 1544 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ASTN2O75129 1339 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-221ENST00000493795 TP73O15350 636 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 FGBP02675 491 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 PGAM2P15259 253 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SSTR1P30872 391 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ADAM8P78325 824 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 ADIGQ0VDE8 80 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 SLC5A9Q2M3M2 681 aa7.89□□□□□ -1.15
BRCA1-221ENST00000493795 CNSTQ6PJW8 725 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms