RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, human

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-223	ENST00000493695	KRT38	O76015	456 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	CYP21A2	P08686	494 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	LINC00271	P0C7V0	271 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	ARSA	P15289	507 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	MCM3	P25205	808 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	MARK3	P27448	753 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	PMP22	Q01453	160 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	GOLGA8F	Q08AF8	430 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	ZNF155	Q12901	538 aa	Predicted RBP	4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	DCTN1	Q14203	1278 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	TMEM95	Q3KNT9	176 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	LCE3C	Q5T5A8	94 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	TTC22	Q5TAA0	569 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	LDHAL6A	Q6ZMR3	332 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	SYT13	Q7L8C5	426 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	MYCT1	Q8N699	235 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	SPATA5	Q8NB90	893 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	MCPH1	Q8NEM0	835 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	NCSTN	Q92542	709 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	OTULIN	Q96BN8	352 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	PPCS	Q9HAB8	311 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	SMAD5-AS1	Q9Y6J3	95 aa		4.2	□□□□□ -1.74
SMC4-223	ENST00000493695	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.2	□□□□□ -1.74
SMC4-223	ENST00000493695		A0A1B0GVY2	172 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	HSPA12A	O43301	675 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	ZIC3	O60481	467 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	RGS11	O94810	467 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	FGF5	P12034	268 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	CD72	P21854	359 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	CST5	P28325	142 aa	Predicted RBP	4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	RBM5	P52756	815 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	DRG2	P55039	364 aa	Known RBP	4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	KRTAP10-3	P60369	221 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	ANO1	Q5XXA6	986 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	NAPEPLD	Q6IQ20	393 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	CHD1L	Q86WJ1	897 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	TAS1R2	Q8TE23	839 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	GOLGA1	Q92805	767 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	TTC14	Q96N46	770 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	PLEKHA2	Q9HB19	425 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	ATP8A2	Q9NTI2	1148 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	SRP68	Q9UHB9	627 aa	Known RBP	4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	GPR52	Q9Y2T5	361 aa		4.19	□□□□□ -1.74
SMC4-223	ENST00000493695	CAPN9	O14815	690 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	SEPT4	O43236	478 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	MTNR1A	P48039	350 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	ARSF	P54793	590 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	ECT2L	Q008S8	904 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	ARHGEF6	Q15052	776 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	ZRSR2	Q15696	482 aa	Known RBP	4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	RASGRP2	Q7LDG7	609 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	METTL27	Q8N6F8	245 aa	Predicted RBP	4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	ANKRD42	Q8N9B4	389 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	TBC1D20	Q96BZ9	403 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	SDCCAG3	Q96C92	435 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	TWSG1	Q9GZX9	223 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	ENTPD7	Q9NQZ7	604 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	CYSLTR2	Q9NS75	346 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	LUZP4	Q9P127	313 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	IFT80	Q9P2H3	777 aa	Predicted RBP	4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	PCDHGB3	Q9Y5G1	929 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	PSAT1	Q9Y617	370 aa		4.18	□□□□□ -1.74
SMC4-223	ENST00000493695	HMX3	A6NHT5	357 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	C17orf100	A8MU93	164 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	DVL1	O14640	695 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	EXTL3	O43909	919 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	DHX16	O60231	1041 aa	Known RBP	4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	METTL18	O95568	372 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	ALDH4A1	P30038	563 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	STX2	P32856	288 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	PNPLA4	P41247	253 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	MVD	P53602	400 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	DVL1P1	P54792	670 aa	Predicted RBP	4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	ARL4C	P56559	192 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	SLC18A2	Q05940	514 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	RUNX2	Q13950	521 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	EFR3A	Q14156	821 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	POSTN	Q15063	836 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	AMZ1	Q400G9	498 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	ATP13A5	Q4VNC0	1218 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	SULT6B1	Q6IMI4	303 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	ARHGAP11A	Q6P4F7	1023 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	WDR73	Q6P4I2	378 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	DSG4	Q86SJ6	1040 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	SATL1	Q86VE3	508 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	SFTPA2	Q8IWL1	248 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	CNBD1	Q8NA66	436 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	LNX1	Q8TBB1	728 aa	Predicted RBP	4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	SPPL3	Q8TCT6	385 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	CCT6B	Q92526	530 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	ZNF501	Q96CX3	271 aa	Predicted RBP	4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	RBM4	Q9BWF3	364 aa	Known RBP	4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	ANKRD10	Q9NXR5	420 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	CDC14A	Q9UNH5	594 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	CNPY2	Q9Y2B0	182 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	CGNL1	Q0VF96	1302 aa		4.17	□□□□□ -1.74
SMC4-223	ENST00000493695	ATXN2	Q99700	1313 aa	Known RBP	4.17	□□□□□ -1.74

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