RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 ZNF234Q14588 700 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 POU6F1Q14863 301 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 QPCTQ16769 361 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 HNRNPA1L2Q32P51 320 aaKnown RBP12.74□□□□□ -0.37
VPS52-220ENST00000493674 ANKRD20A4Q4UJ75 823 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 TNFAIP8L3Q5GJ75 292 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 TRMT10BQ6PF06 316 aaKnown RBP12.74□□□□□ -0.37
VPS52-220ENST00000493674 CROCCP2Q86T23 111 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 RALGPS2Q86X27 583 aaPredicted RBP12.74□□□□□ -0.37
VPS52-220ENST00000493674 ZSWIM9Q86XI8 627 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 CAMK1DQ8IU85 385 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 CHST14Q8NCH0 376 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 PPHLN1Q8NEY8 458 aaKnown RBP12.74□□□□□ -0.37
VPS52-220ENST00000493674 OR6K2Q8NGY2 324 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 UHMK1Q8TAS1 419 aaKnown RBP12.74□□□□□ -0.37
VPS52-220ENST00000493674 FBF1Q8TES7 1133 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 ZNF641Q96N77 438 aaPredicted RBP12.74□□□□□ -0.37
VPS52-220ENST00000493674 ADGRE3Q9BY15 652 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 C8orf33Q9H7E9 229 aaPredicted RBP12.74□□□□□ -0.37
VPS52-220ENST00000493674 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
VPS52-220ENST00000493674 SLC2A4RGQ9NR83 387 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 LGALS13Q9UHV8 139 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 PPIL1Q9Y3C6 166 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 RPS6KL1Q9Y6S9 549 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 FAM169AQ9Y6X4 670 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 EDDM13A0A1B0GTR0 161 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 SHISA7A6NL88 538 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 NPC1O15118 1278 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 GLULP15104 373 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 NMBRP28336 390 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 SERPINA4P29622 427 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 GKP32189 559 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 GALK1P51570 392 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 BCL2L1Q07817 233 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 KLHL38Q2WGJ6 581 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 CEP85LQ5SZL2 805 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 ARMC12Q5T9G4 340 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 KIAA0930Q6ICG6 404 aaPredicted RBP12.73□□□□□ -0.37
VPS52-220ENST00000493674 CASC4Q6P4E1 433 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 TXNDC11Q6PKC3 985 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 CAPN12Q6ZSI9 719 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 NLRP9Q7RTR0 991 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 KDELC2Q7Z4H8 507 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 RIBC1Q8N443 379 aaPredicted RBP12.73□□□□□ -0.37
VPS52-220ENST00000493674 TTC30BQ8N4P2 665 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 BRSK1Q8TDC3 778 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 EPS8L3Q8TE67 593 aaKnown RBP12.73□□□□□ -0.37
VPS52-220ENST00000493674 UCMAQ8WVF2 138 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 ZNF669Q96BR6 464 aaPredicted RBP12.73□□□□□ -0.37
VPS52-220ENST00000493674 MFSD3Q96ES6 412 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 MSANTD3Q96H12 275 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 LRIG1Q96JA1 1093 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 ZNF778Q96MU6 729 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 LYSMD1Q96S90 227 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 CYTH2Q99418 400 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 P2RY13Q9BPV8 354 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 C19orf43Q9BQ61 176 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 HEPHQ9BQS7 1158 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 COL25A1Q9BXS0 654 aaPredicted RBP12.73□□□□□ -0.37
VPS52-220ENST00000493674 TMBIM4Q9HC24 238 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 MED4Q9NPJ6 270 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 CHRAC1Q9NRG0 131 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 SMYD2Q9NRG4 433 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 SLC24A2Q9UI40 661 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 SLC8A2Q9UPR5 921 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 SPO11Q9Y5K1 396 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 TRIOO75962 3097 aa12.73□□□□□ -0.37
VPS52-220ENST00000493674 A0A0J9YYE9 177 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 EXOC1LA0A1B0GW35 172 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 A0A1W2PQ67 120 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 TBC1D3BA6NDS4 549 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 H3BQF6 201 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 K7EQS6 105 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 OPA1O60313 960 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 SIN3BO75182 1162 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 TRBC1P01850 177 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 ASGR2P07307 311 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 IVLP07476 585 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 CTSLP07711 333 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 C7P10643 843 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 ARNTP27540 789 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 IL12RB1P42701 662 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 KIR2DL1P43626 348 aaPredicted RBP12.72□□□□□ -0.37
VPS52-220ENST00000493674 ARCN1P48444 511 aaKnown RBP12.72□□□□□ -0.37
VPS52-220ENST00000493674 ZNF140P52738 457 aaPredicted RBP12.72□□□□□ -0.37
VPS52-220ENST00000493674 ST8SIA6P61647 398 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 RAD51Q06609 339 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 NAB1Q13506 487 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 LAMB3Q13751 1172 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 EFTUD2Q15029 972 aaKnown RBP eCLIP12.72□□□□□ -0.375e-10■■□□□ 13.4
VPS52-220ENST00000493674 E2F5Q15329 346 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 CDKN3Q16667 212 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 LONRF1Q17RB8 773 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 KBTBD12Q3ZCT8 623 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 ACCSLQ4AC99 568 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 TMEM196Q5HYL7 178 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 C9orf64Q5T6V5 341 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 TSTD2Q5T7W7 516 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 EGFLAMQ63HQ2 1017 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 MARK2Q7KZI7 788 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms