RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 C11orf63Q6NUN7 778 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 RAD9BQ6WBX8 426 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 GCNT7Q6ZNI0 430 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 ABI3BPQ7Z7G0 1075 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 SPATS2Q86XZ4 545 aaKnown RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 CCDC13Q8IYE1 715 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 PGBD5Q8N414 524 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 DENND6BQ8NEG7 585 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 OR13H1Q8NG92 308 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 TPCN2Q8NHX9 752 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 KIAA1524Q8TCG1 905 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 PDCD6IPQ8WUM4 868 aaKnown RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 MAML1Q92585 1016 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 CENPTQ96BT3 561 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 HDAC11Q96DB2 347 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 ECHDC3Q96DC8 303 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 IFT43Q96FT9 208 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 BMFQ96LC9 184 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 CAMK1GQ96NX5 476 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 KLF6Q99612 283 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 SEMA3CQ99985 751 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 WRAP53Q9BUR4 548 aaKnown RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 POLR1EQ9GZS1 481 aaKnown RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 BRD8Q9H0E9 1235 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 NOD2Q9HC29 1040 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 FZD3Q9NPG1 666 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 DTLQ9NZJ0 730 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 GGT7Q9UJ14 662 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 PCOLCE2Q9UKZ9 415 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 PHTF1Q9UMS5 762 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 TFR2Q9UP52 801 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 ATP8A1Q9Y2Q0 1164 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 HYOU1Q9Y4L1 999 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 PCDHGC4Q9Y5F7 938 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 DMXL1Q9Y485 3027 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 TP53BP1Q12888 1972 aaPredicted RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 SPAARA0A1B0GVQ0 90 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 POM121BA6NF01 834 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 PPP1R12AO14974 1030 aaPredicted RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 RAD51BO15315 384 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 PJA2O43164 708 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 SPINT1O43278 529 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 HTRA2O43464 458 aaPredicted RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 TNFSF14O43557 240 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 CST8O60676 142 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 CBFA2T3O75081 653 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 TRIM16O95361 564 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 MAP3K6O95382 1288 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 CPP00450 1065 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 JCHAINP01591 159 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 PRKCGP05129 697 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 ELFN1P0C7U0 828 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 CYP2A6P11509 494 aaPredicted RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 CA4P22748 312 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 CETN2P41208 172 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 CDKN2BP42772 138 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 THOP1P52888 689 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 YPEL5P62699 121 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 DYNLT1P63172 113 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 PPIDQ08752 370 aaKnown RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 AP1B1Q10567 949 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 BNIP3Q12983 259 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 PDE1CQ14123 709 aaPredicted RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 LRRC14Q15048 493 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 AGERQ15109 404 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 SHBQ15464 509 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 HS1BP3Q53T59 392 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 TFDP3Q5H9I0 405 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 ARMC12Q5T9G4 340 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 MFSD7Q6UXD7 560 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 KYAT3Q6YP21 454 aaKnown RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 SPOCD1Q6ZMY3 1216 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 DPPA4Q7L190 304 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 PTAR1Q7Z6K3 402 aaPredicted RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 ZSWIM9Q86XI8 627 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 GATAD2AQ86YP4 633 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 CCDC50Q8IVM0 306 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 KATNAL2Q8IYT4 538 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 EID2Q8N6I1 236 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 PLD5Q8N7P1 536 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 EXD1Q8NHP7 514 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 SAP25Q8TEE9 199 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 SPOCK2Q92563 424 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 P3H4Q92791 437 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 RBM41Q96IZ5 413 aaKnown RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 LGMNQ99538 433 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 KCTD5Q9NXV2 234 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 APOBEC2Q9Y235 224 aaKnown RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 REXO2Q9Y3B8 237 aaKnown RBP7.02□□□□□ -1.29
TOP3A-207ENST00000493648 TTLL3Q9Y4R7 772 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 DUSP10Q9Y6W6 482 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 CABIN1Q9Y6J0 2220 aa7.02□□□□□ -1.29
TOP3A-207ENST00000493648 TDRD6O60522 2096 aaKnown RBP7.01□□□□□ -1.29
TOP3A-207ENST00000493648 SPTY2D1-AS1A0A0U1RR47 76 aa7.01□□□□□ -1.29
TOP3A-207ENST00000493648 CCDC66A2RUB6 948 aa7.01□□□□□ -1.29
TOP3A-207ENST00000493648 RCCD1A6NED2 376 aa7.01□□□□□ -1.29
TOP3A-207ENST00000493648 NEMP2A6NFY4 417 aa7.01□□□□□ -1.29
TOP3A-207ENST00000493648 A8MX80 341 aa7.01□□□□□ -1.29
TOP3A-207ENST00000493648 H3BM21 787 aa7.01□□□□□ -1.29
TOP3A-207ENST00000493648 KCNK1O00180 336 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms