RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MUSKO15146 869 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 YY2O15391 372 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 HTRA2O43464 458 aaPredicted RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 TCEA3O75764 348 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 RNF8O76064 485 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 PIGNO95427 931 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 C6P13671 934 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 TSHRP16473 764 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 CR2P20023 1033 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 TGM2P21980 687 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 IL1R2P27930 398 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 ITPKBP27987 946 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 ACTN2P35609 894 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 ZNF165P49910 485 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 HK3P52790 923 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 THOP1P52888 689 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 SEMG2Q02383 582 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 LRRC14Q15048 493 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 IRF4Q15306 451 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 ASIC2Q16515 512 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 ISXQ2M1V0 245 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 BOLA3Q53S33 107 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 LRRC73Q5JTD7 316 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 TMCO4Q5TGY1 634 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 GUSBP11Q6P575 273 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 ARHGAP36Q6ZRI8 547 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 POLNQ7Z5Q5 900 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 VPS36Q86VN1 386 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 CAMK1DQ8IU85 385 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 RBFAQ8N0V3 343 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 LSMEM2Q8N112 164 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 TSEN2Q8NCE0 465 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 LSM14AQ8ND56 463 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 IFI44Q8TCB0 444 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 LMX1AQ8TE12 382 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 CXorf40AQ8TE69 158 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 SNRNP27Q8WVK2 155 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 PRR11Q96HE9 360 aaPredicted RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 CELF6Q96J87 481 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 DEPDC7Q96QD5 511 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 IL12RB2Q99665 862 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 DHX35Q9H5Z1 703 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 ASCL3Q9NQ33 180 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 GPATCH2LQ9NWQ4 482 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 CNOT8Q9UFF9 292 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 APOBEC3BQ9UH17 382 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 PCSK1NQ9UHG2 260 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 IPO11Q9UI26 975 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 NENFQ9UMX5 172 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 ATP8A1Q9Y2Q0 1164 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 RAI2Q9Y5P3 530 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 AK5Q9Y6K8 562 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 SCN8AQ9UQD0 1980 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 CFAP46Q8IYW2 2715 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 TNFRSF10CO14798 259 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 ATMINO43313 823 aaPredicted RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 PRPSAP2O60256 369 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 CSO75390 466 aaKnown RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 PALMO75781 387 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 TCF4P15884 667 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 DESP17661 470 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 IL4RP24394 825 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 HSPA9P38646 679 aaKnown RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 MLLT3P42568 568 aaPredicted RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 ABCG1P45844 678 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 LIG3P49916 1009 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 BLKP51451 505 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 PDX1P52945 283 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 ADKP55263 362 aaKnown RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 KIAA1024LP59773 190 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 AP1S1P61966 158 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 PPARDQ03181 441 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 TLE3Q04726 772 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 KLHL30Q0D2K2 578 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 SLC10A7Q0GE19 358 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 MTM1Q13496 603 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 PIGHQ14442 188 aaPredicted RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 INPP5AQ14642 412 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 NFATC4Q14934 902 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 NR0B2Q15466 257 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 CDKN3Q16667 212 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 ALG11Q2TAA5 492 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 DEFB133Q30KQ1 61 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 FILIP1LQ4L180 1135 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 PRRT3Q5FWE3 981 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 RALGPS1Q5JS13 557 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 PERM1Q5SV97 790 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 KCTD16Q68DU8 428 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 OGFOD3Q6PK18 319 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 LIPIQ6XZB0 460 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 DPPA4Q7L190 304 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 EFL1Q7Z2Z2 1120 aaKnown RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 TP53INP2Q8IXH6 220 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 SLC35F3Q8IY50 421 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 FSTL5Q8N475 847 aaPredicted RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 WDR48Q8TAF3 677 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 MAPK15Q8TD08 544 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 TEKT4Q8WW24 435 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 NAT6Q93015 286 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 FUBP1Q96AE4 644 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms