RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 KLHL40Q2TBA0 621 aa8.83□□□□□ -1
NUP50-217ENST00000491860 BOLA3Q53S33 107 aa8.83□□□□□ -1
NUP50-217ENST00000491860 ZNF542PQ5EBM4 170 aa8.83□□□□□ -1
NUP50-217ENST00000491860 PRRT3Q5FWE3 981 aa8.83□□□□□ -1
NUP50-217ENST00000491860 FIGNQ5HY92 759 aa8.83□□□□□ -1
NUP50-217ENST00000491860 RALGPS1Q5JS13 557 aa8.83□□□□□ -1
NUP50-217ENST00000491860 C6orf132Q5T0Z8 1188 aa8.83□□□□□ -1
NUP50-217ENST00000491860 RBM44Q6ZP01 1051 aaKnown RBP8.83□□□□□ -1
NUP50-217ENST00000491860 RFX8Q6ZV50 586 aa8.83□□□□□ -1
NUP50-217ENST00000491860 GKN2Q86XP6 184 aa8.83□□□□□ -1
NUP50-217ENST00000491860 MARCH9Q86YJ5 346 aa8.83□□□□□ -1
NUP50-217ENST00000491860 ZNF843Q8N446 348 aa8.83□□□□□ -1
NUP50-217ENST00000491860 PAF1Q8N7H5 531 aa8.83□□□□□ -1
NUP50-217ENST00000491860 ARL10Q8N8L6 244 aa8.83□□□□□ -1
NUP50-217ENST00000491860 TP53I13Q8NBR0 393 aaPredicted RBP8.83□□□□□ -1
NUP50-217ENST00000491860 NSMCE1Q8WV22 266 aa8.83□□□□□ -1
NUP50-217ENST00000491860 SYT11Q9BT88 431 aa8.83□□□□□ -1
NUP50-217ENST00000491860 DPH1Q9BZG8 443 aa8.83□□□□□ -1
NUP50-217ENST00000491860 DHX35Q9H5Z1 703 aaKnown RBP8.83□□□□□ -1
NUP50-217ENST00000491860 HAUS4Q9H6D7 363 aa8.83□□□□□ -1
NUP50-217ENST00000491860 PDFQ9HBH1 243 aa8.83□□□□□ -1
NUP50-217ENST00000491860 LHX3Q9UBR4 397 aa8.83□□□□□ -1
NUP50-217ENST00000491860 SEPT3Q9UH03 358 aa8.83□□□□□ -1
NUP50-217ENST00000491860 ITM2BQ9Y287 266 aa8.83□□□□□ -1
NUP50-217ENST00000491860 ATP8A1Q9Y2Q0 1164 aa8.83□□□□□ -1
NUP50-217ENST00000491860 ACTL7AQ9Y615 435 aa8.83□□□□□ -1
NUP50-217ENST00000491860 PTPRQQ9UMZ3 2332 aa8.82□□□□□ -1
NUP50-217ENST00000491860 ANKRD36A6QL64 1941 aa8.82□□□□□ -1
NUP50-217ENST00000491860 A0A1B0GTH6 734 aa8.82□□□□□ -1
NUP50-217ENST00000491860 TEX51A0A1B0GUA7 166 aa8.82□□□□□ -1
NUP50-217ENST00000491860 CPED1A4D0V7 1026 aa8.82□□□□□ -1
NUP50-217ENST00000491860 LRRC53A6NM62 1247 aa8.82□□□□□ -1
NUP50-217ENST00000491860 H3BRJ5 948 aa8.82□□□□□ -1
NUP50-217ENST00000491860 CACNB4O00305 520 aaPredicted RBP8.82□□□□□ -1
NUP50-217ENST00000491860 SPINT1O43278 529 aa8.82□□□□□ -1
NUP50-217ENST00000491860 USP12O75317 370 aa8.82□□□□□ -1
NUP50-217ENST00000491860 CSO75390 466 aaKnown RBP8.82□□□□□ -1
NUP50-217ENST00000491860 NEBLO76041 1014 aa8.82□□□□□ -1
NUP50-217ENST00000491860 FTLP02792 175 aaPredicted RBP8.82□□□□□ -1
NUP50-217ENST00000491860 HOXC4P09017 264 aaPredicted RBP8.82□□□□□ -1
NUP50-217ENST00000491860 RBMS1P29558 406 aaKnown RBP8.82□□□□□ -1
NUP50-217ENST00000491860 MMP12P39900 470 aa8.82□□□□□ -1
NUP50-217ENST00000491860 PAPOLAP51003 745 aaKnown RBP8.82□□□□□ -1
NUP50-217ENST00000491860 HK3P52790 923 aa8.82□□□□□ -1
NUP50-217ENST00000491860 ADKP55263 362 aaKnown RBP8.82□□□□□ -1
NUP50-217ENST00000491860 GABREP78334 506 aa8.82□□□□□ -1
NUP50-217ENST00000491860 EIF2B5Q13144 721 aaKnown RBP8.82□□□□□ -1
NUP50-217ENST00000491860 PIGHQ14442 188 aaPredicted RBP8.82□□□□□ -1
NUP50-217ENST00000491860 NFATC4Q14934 902 aa8.82□□□□□ -1
NUP50-217ENST00000491860 IRF4Q15306 451 aa8.82□□□□□ -1
NUP50-217ENST00000491860 ISXQ2M1V0 245 aa8.82□□□□□ -1
NUP50-217ENST00000491860 DEFB133Q30KQ1 61 aa8.82□□□□□ -1
NUP50-217ENST00000491860 ANO6Q4KMQ2 910 aa8.82□□□□□ -1
NUP50-217ENST00000491860 AFMIDQ63HM1 303 aa8.82□□□□□ -1
NUP50-217ENST00000491860 LEKR1Q6ZMV7 388 aa8.82□□□□□ -1
NUP50-217ENST00000491860 EFL1Q7Z2Z2 1120 aaKnown RBP8.82□□□□□ -1
NUP50-217ENST00000491860 ZNF605Q86T29 641 aa8.82□□□□□ -1
NUP50-217ENST00000491860 SRLQ86TD4 932 aa8.82□□□□□ -1
NUP50-217ENST00000491860 LRRC49Q8IUZ0 686 aa8.82□□□□□ -1
NUP50-217ENST00000491860 ARL14Q8N4G2 192 aa8.82□□□□□ -1
NUP50-217ENST00000491860 SPOCK2Q92563 424 aa8.82□□□□□ -1
NUP50-217ENST00000491860 ZNF653Q96CK0 615 aa8.82□□□□□ -1
NUP50-217ENST00000491860 WDR92Q96MX6 357 aa8.82□□□□□ -1
NUP50-217ENST00000491860 PSKH2Q96QS6 385 aa8.82□□□□□ -1
NUP50-217ENST00000491860 LGMNQ99538 433 aa8.82□□□□□ -1
NUP50-217ENST00000491860 WRAP53Q9BUR4 548 aaKnown RBP8.82□□□□□ -1
NUP50-217ENST00000491860 SNRNP25Q9BV90 132 aaKnown RBP8.82□□□□□ -1
NUP50-217ENST00000491860 HSD3B7Q9H2F3 369 aa8.82□□□□□ -1
NUP50-217ENST00000491860 PCDH12Q9NPG4 1184 aa8.82□□□□□ -1
NUP50-217ENST00000491860 CNOT8Q9UFF9 292 aaKnown RBP8.82□□□□□ -1
NUP50-217ENST00000491860 LCMT1Q9UIC8 334 aa8.82□□□□□ -1
NUP50-217ENST00000491860 GGT7Q9UJ14 662 aa8.82□□□□□ -1
NUP50-217ENST00000491860 PCDHGA8Q9Y5G5 932 aa8.82□□□□□ -1
NUP50-217ENST00000491860 DGKBQ9Y6T7 804 aa8.82□□□□□ -1
NUP50-217ENST00000491860 ZNF462Q96JM2 2506 aa8.81□□□□□ -1
NUP50-217ENST00000491860 ATMQ13315 3056 aa8.81□□□□□ -1
NUP50-217ENST00000491860 RP1P56715 2156 aa8.81□□□□□ -1
NUP50-217ENST00000491860 LY6G6EA0A0G2JKS1 128 aa8.81□□□□□ -1
NUP50-217ENST00000491860 A0A1W2PQJ5 194 aa8.81□□□□□ -1
NUP50-217ENST00000491860 TMCO5BA8MYB1 307 aa8.81□□□□□ -1
NUP50-217ENST00000491860 J3KR12 359 aa8.81□□□□□ -1
NUP50-217ENST00000491860 TNFRSF10CO14798 259 aa8.81□□□□□ -1
NUP50-217ENST00000491860 TEX33O43247 280 aa8.81□□□□□ -1
NUP50-217ENST00000491860 TLX3O43711 291 aaPredicted RBP8.81□□□□□ -1
NUP50-217ENST00000491860 SOCS5O75159 536 aa8.81□□□□□ -1
NUP50-217ENST00000491860 PIGNO95427 931 aa8.81□□□□□ -1
NUP50-217ENST00000491860 SERPINC1P01008 464 aa8.81□□□□□ -1
NUP50-217ENST00000491860 TNFP01375 233 aa8.81□□□□□ -1
NUP50-217ENST00000491860 ELFN1P0C7U0 828 aa8.81□□□□□ -1
NUP50-217ENST00000491860 C6P13671 934 aa8.81□□□□□ -1
NUP50-217ENST00000491860 TSHRP16473 764 aa8.81□□□□□ -1
NUP50-217ENST00000491860 ERCC2P18074 760 aa8.81□□□□□ -1
NUP50-217ENST00000491860 ITPKBP27987 946 aa8.81□□□□□ -1
NUP50-217ENST00000491860 MIPP30301 263 aa8.81□□□□□ -1
NUP50-217ENST00000491860 ZNF165P49910 485 aa8.81□□□□□ -1
NUP50-217ENST00000491860 LIG3P49916 1009 aa8.81□□□□□ -1
NUP50-217ENST00000491860 TMPRSS3P57727 454 aa8.81□□□□□ -1
NUP50-217ENST00000491860 KIAA1024LP59773 190 aa8.81□□□□□ -1
NUP50-217ENST00000491860 SRP54P61011 504 aaKnown RBP8.81□□□□□ -1
NUP50-217ENST00000491860 OGDHQ02218 1023 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms