RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ITGB7P26010 798 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 AKT2P31751 481 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 SERPINB6P35237 376 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 HNF1BP35680 557 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 GJC1P36383 396 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 DNA2P51530 1060 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 NEK3P51956 506 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 NDST2P52849 883 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 GEMIN4P57678 1058 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 SLC25A11Q02978 314 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 POLD3Q15054 466 aaPredicted RBP11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 SMTNL2Q2TAL5 461 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 CARD16Q5EG05 197 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 LRRC73Q5JTD7 316 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 RETSATQ6NUM9 610 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 NEK5Q6P3R8 708 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 RFX8Q6ZV50 586 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 PTAR1Q7Z6K3 402 aaPredicted RBP11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 VSIG1Q86XK7 387 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 PYROXD2Q8N2H3 581 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 PCDH20Q8N6Y1 951 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 RTL3Q8N8U3 475 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 TRIM58Q8NG06 486 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 ARHGEF2Q92974 986 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 NXPE2Q96DL1 559 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 RBM41Q96IZ5 413 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 HEPHQ9BQS7 1158 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 CEP44Q9C0F1 390 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 NOL6Q9H6R4 1146 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 EVA1BQ9NVM1 165 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 TFR2Q9UP52 801 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 U3KQA8 63 aa11.16□□□□□ -0.62
TMEM39A-211ENST00000491685 CFAP46Q8IYW2 2715 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 LRRD1A4D1F6 860 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 ARHGAP42A6NI28 874 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 KIF2AO00139 706 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 PALMO75781 387 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 PIAS2O75928 621 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 NEBLO76041 1014 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 ERCC2P18074 760 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 IL1R2P27930 398 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 ITPKBP27987 946 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 RWDD2BP57060 319 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 TAS2R40P59535 323 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 COPS2P61201 443 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 SEMG2Q02383 582 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 TFDP2Q14188 446 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 ATXN7L2Q5T6C5 722 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 TMCO3Q6UWJ1 677 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 Q6ZSR6 202 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 LRRC49Q8IUZ0 686 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 OR4C6Q8NH72 309 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 NSMCE1Q8WV22 266 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 PEBP4Q96S96 227 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 KLF6Q99612 283 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 ZNF670Q9BS34 389 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 KLC2Q9H0B6 622 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 PCDH18Q9HCL0 1135 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 KLHL11Q9NVR0 708 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 HAUS2Q9NVX0 235 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 GPATCH2LQ9NWQ4 482 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 CWC15Q9P013 229 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 HECAQ9UBI9 543 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 KLF15Q9UIH9 416 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 PNMA8BQ9ULN7 279 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 PCDHB1Q9Y5F3 818 aa11.15□□□□□ -0.62
TMEM39A-211ENST00000491685 KNTC1P50748 2209 aa11.15□□□□□ -0.63
TMEM39A-211ENST00000491685 ZSCAN5CA6NGD5 496 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 A6NNZ2 444 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 ZNF487B1APH4 448 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 RIOK3O14730 519 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 CASC3O15234 703 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 KIF5CO60282 957 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 C1QL1O75973 258 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 PAK4O96013 591 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 KRT1P04264 644 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 ITIH2P19823 946 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 CTNNA2P26232 953 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 ZNF211Q13398 564 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 ILKQ13418 452 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 FZD2Q14332 565 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 CA9Q16790 459 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 PARP15Q460N3 678 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 ATP13A4Q4VNC1 1196 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 ANKRD20A8PQ5CZ79 823 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 KIAA1161Q6NSJ0 714 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 KYAT3Q6YP21 454 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 CCDC50Q8IVM0 306 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 UMODL1-AS1Q8N2C9 162 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 RYBPQ8N488 228 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 EXD1Q8NHP7 514 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 RNF157Q96PX1 679 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 KCTD15Q96SI1 283 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 FERMT1Q9BQL6 677 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 SLC17A9Q9BYT1 436 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 SALL4Q9UJQ4 1053 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 CLCA2Q9UQC9 943 aa11.14□□□□□ -0.63
TMEM39A-211ENST00000491685 HYOU1Q9Y4L1 999 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms