RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	RACK1	P63244	317 aa	Known RBP	18.71	■□□□□ 0.59
C4A-256	ENST00000490663	FAM193A	P78312	1265 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	ARHGAP8	P85298	464 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	GRM3	Q14832	879 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	TEAD4	Q15561	434 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	CCDC181	Q5TID7	509 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	KIAA1161	Q6NSJ0	714 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	GCNT7	Q6ZNI0	430 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	BBS12	Q6ZW61	710 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	SYCE1	Q8N0S2	351 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	P3H4	Q92791	437 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	RAB7B	Q96AH8	199 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	ECHDC3	Q96DC8	303 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	ZNF641	Q96N77	438 aa	Predicted RBP	18.71	■□□□□ 0.59
C4A-256	ENST00000490663	AGAP3	Q96P47	875 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	IL12RB2	Q99665	862 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	SLC17A9	Q9BYT1	436 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	POLR1E	Q9GZS1	481 aa	Known RBP	18.71	■□□□□ 0.59
C4A-256	ENST00000490663	FNDC3A	Q9Y2H6	1198 aa	Known RBP	18.71	■□□□□ 0.59
C4A-256	ENST00000490663	PCDHB9	Q9Y5E1	797 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	18.7	■□□□□ 0.58
C4A-256	ENST00000490663	TSPAN6	O43657	245 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	SYP	P08247	313 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	PDHA1	P08559	390 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	MMP12	P39900	470 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	CD86	P42081	329 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	ID4	P47928	161 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	RPS21	P63220	83 aa	Known RBP	18.7	■□□□□ 0.58
C4A-256	ENST00000490663	IFI35	P80217	286 aa	Predicted RBP	18.7	■□□□□ 0.58
C4A-256	ENST00000490663	OTUD4	Q01804	1114 aa	Known RBP	18.7	■□□□□ 0.58
C4A-256	ENST00000490663	RALGDS	Q12967	914 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	PRKD1	Q15139	912 aa	Predicted RBP	18.7	■□□□□ 0.58
C4A-256	ENST00000490663	HLA-B	Q31612	363 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	NEK5	Q6P3R8	708 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	BRAT1	Q6PJG6	821 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	ARRDC2	Q8TBH0	407 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	CXorf40A	Q8TE69	158 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	FEM1C	Q96JP0	617 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	GAREM1	Q9H706	876 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	ATP8A1	Q9Y2Q0	1164 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	RAI2	Q9Y5P3	530 aa		18.7	■□□□□ 0.58
C4A-256	ENST00000490663	TCRBV7S2A1N4T	A0A589	114 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	RIOK3	O14730	519 aa	Known RBP	18.69	■□□□□ 0.58
C4A-256	ENST00000490663	SLC30A4	O14863	429 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	FOXD2	O60548	495 aa	Predicted RBP	18.69	■□□□□ 0.58
C4A-256	ENST00000490663	MMP2	P08253	660 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	ALPI	P09923	528 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	HNRNPA2B1	P22626	353 aa	Known RBP	18.69	■□□□□ 0.58
C4A-256	ENST00000490663	C21orf59	P57076	290 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	RNF10	Q8N5U6	811 aa	Known RBP	18.69	■□□□□ 0.58
C4A-256	ENST00000490663	UBL4B	Q8N7F7	174 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	ACTL9	Q8TC94	416 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	TFB1M	Q8WVM0	346 aa	Known RBP	18.69	■□□□□ 0.58
C4A-256	ENST00000490663	HES6	Q96HZ4	224 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	QKI	Q96PU8	341 aa	Known RBP eCLIP	18.69	■□□□□ 0.58
C4A-256	ENST00000490663	BRD8	Q9H0E9	1235 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	B4GALT6	Q9UBX8	382 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	DMTF1	Q9Y222	760 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	CHKB	Q9Y259	395 aa		18.69	■□□□□ 0.58
C4A-256	ENST00000490663	POM121B	A6NF01	834 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	MIF4GD	A9UHW6	222 aa	Known RBP	18.68	■□□□□ 0.58
C4A-256	ENST00000490663	PRAMEF26	H0Y7S4	382 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663		H7C0C1	242 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	VILL	O15195	856 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	HTRA2	O43464	458 aa	Predicted RBP	18.68	■□□□□ 0.58
C4A-256	ENST00000490663	NRDC	O43847	1150 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	SOCS5	O75159	536 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	PGLS	O95336	258 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	C6	P13671	934 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	PTPN3	P26045	913 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	AKT2	P31751	481 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	IGFALS	P35858	605 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	CTSK	P43235	329 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	ATP5O	P48047	213 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	LIG3	P49916	1009 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	COPS2	P61201	443 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	ELP6	Q0PNE2	266 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	STAT4	Q14765	748 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	NOMO1	Q15155	1222 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	TMEM52B	Q4KMG9	183 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	DENND2C	Q68D51	928 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	ALG1L	Q6GMV1	187 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	PTAR1	Q7Z6K3	402 aa	Predicted RBP	18.68	■□□□□ 0.58
C4A-256	ENST00000490663	SPATS2	Q86XZ4	545 aa	Known RBP	18.68	■□□□□ 0.58
C4A-256	ENST00000490663	TMEM145	Q8NBT3	493 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	OR13H1	Q8NG92	308 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	FATE1	Q969F0	183 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	RBM15	Q96T37	977 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
C4A-256	ENST00000490663	KLF6	Q99612	283 aa	Predicted RBP	18.68	■□□□□ 0.58
C4A-256	ENST00000490663	C1QTNF2	Q9BXJ5	285 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	DLL3	Q9NYJ7	618 aa		18.68	■□□□□ 0.58
C4A-256	ENST00000490663	NPIPB15	A6NHN6	443 aa	Predicted RBP	18.67	■□□□□ 0.58
C4A-256	ENST00000490663	APOC4-APOC2	K7ER74	178 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	OPHN1	O60890	802 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	TM7SF2	O76062	418 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	APOC2	P02655	101 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	THEGL	P0DJG4	465 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	RBL1	P28749	1068 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	PTPN7	P35236	360 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	NR2C2	P49116	596 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms