RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 KNTC1P50748 2209 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 TMEM191CA6NGB0 347 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 IGLON5A6NGN9 336 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 WASH4PA8MWX3 477 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 RASA4BC9J798 803 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 PRAMEF26H0Y7S4 382 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 KRIT1O00522 736 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 TRIM38O00635 465 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 ENC1O14682 589 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 CASC3O15234 703 aaKnown RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 RASA4O43374 803 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 TNFSF14O43557 240 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 DYRK3O43781 588 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 BUB1BO60566 1050 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 MMP20O60882 483 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 RAMP2O60895 175 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 TMCC1O94876 653 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 TRIM16O95361 564 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 LDOC1O95751 146 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 PRNPP04156 253 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 PRKCGP05129 697 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 UGT2B4P06133 528 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 THEGLP0DJG4 465 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 ADRB3P13945 408 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 ALAS2P22557 587 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 PSMA2P25787 234 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 IL1R2P27930 398 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 EPHA8P29322 1005 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 MIPP30301 263 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 PBX1P40424 430 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 GRK6P43250 576 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 RECQLP46063 649 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 RGRP47804 291 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 RXRGP48443 463 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 MAPKAPK2P49137 400 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 FANCCQ00597 558 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 VAC14Q08AM6 782 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 FAM182AQ5T1J6 154 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 SFMBT2Q5VUG0 894 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 HGSNATQ68CP4 663 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 TXNRD3NBQ6F5E7 133 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 DCUN1D2Q6PH85 259 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 Q6ZSR6 202 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 TMC6Q7Z403 805 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 ZNF354CQ86Y25 554 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 SLC22A18ASQ8N1D0 253 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 PCDH20Q8N6Y1 951 aaKnown RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 RTL3Q8N8U3 475 aaKnown RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 TMEM145Q8NBT3 493 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 EXOC2Q96KP1 924 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 CNDP2Q96KP4 475 aaKnown RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 KLF6Q99612 283 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 CDC6Q99741 560 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 CNPY3Q9BT09 278 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 SLC17A9Q9BYT1 436 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 CEP44Q9C0F1 390 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 MAGEH1Q9H213 219 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 DHX35Q9H5Z1 703 aaKnown RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 PREBQ9HCU5 417 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 LHX3Q9UBR4 397 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 CNOT8Q9UFF9 292 aaKnown RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 PNMA8BQ9ULN7 279 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 APOBEC2Q9Y235 224 aaKnown RBP7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 DAAM1Q9Y4D1 1078 aa7.42□□□□□ -1.22
PRPF4B-208ENST00000490653 SCO2A0A1W2PP80 73 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 A0A1W2PQC6 194 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 TRABD2BA6NFA1 517 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 SIGLEC6O43699 453 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 NEBLO76041 1014 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 PIGNO95427 931 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 ETFBP38117 255 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 PRKCIP41743 596 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 PAPOLAP51003 745 aaKnown RBP7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 NEK3P51956 506 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 KLHL30Q0D2K2 578 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 SERINC3Q13530 473 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 SETMARQ53H47 684 aaPredicted RBP7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 FBXL19Q6PCT2 694 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 GDPD4Q6W3E5 623 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 ZSWIM9Q86XI8 627 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 ARHGAP12Q8IWW6 846 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 OR2AP1Q8NGE2 309 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 ISG20Q96AZ6 181 aaKnown RBP7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 ARHGEF26Q96DR7 871 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 LRIG1Q96JA1 1093 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 FEM1CQ96JP0 617 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 SNRNP25Q9BV90 132 aaKnown RBP7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 CALN1Q9BXU9 219 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 NAT10Q9H0A0 1025 aaKnown RBP7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 TCEAL2Q9H3H9 227 aaPredicted RBP7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 LRRC19Q9H756 370 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 ERVMER34-1Q9H9K5 563 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 PDFQ9HBH1 243 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 DYRK4Q9NR20 520 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 MBNL1Q9NR56 388 aaKnown RBP7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 ETNK2Q9NVF9 386 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 CWC15Q9P013 229 aaKnown RBP7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 FTSJ1Q9UET6 329 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 AP4E1Q9UPM8 1137 aa7.41□□□□□ -1.22
PRPF4B-208ENST00000490653 DMTF1Q9Y222 760 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms