RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ACAA1P09110 424 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 SPARCP09486 303 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 UBL4AP11441 157 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 CHATP28329 748 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 GLUD2P49448 558 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 CXCR3P49682 368 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 EFNA5P52803 228 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 FOXG1P55316 489 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 IRX6P78412 446 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 EGR4Q05215 589 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 Q0VFX4 171 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 DDX10Q13206 875 aaKnown RBP5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 EFHC1Q5JVL4 640 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 TXNDC8Q6A555 127 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 LCTLQ6UWM7 567 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 RSRC2Q7L4I2 434 aaKnown RBP5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 MAATS1Q7Z4T9 603 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 DHX40Q8IX18 779 aaKnown RBP5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 SAMD14Q8IZD0 417 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 IQCF1Q8N6M8 205 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 SCCPDHQ8NBX0 429 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 ARRDC2Q8TBH0 407 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 METTL6Q8TCB7 284 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 MIB2Q96AX9 1013 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 ZPBPQ9BS86 351 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 MAGEE1Q9HCI5 957 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 PCDHB16Q9NRJ7 776 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 SMC4Q9NTJ3 1288 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 ZNF69Q9UC07 566 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 AAR2Q9Y312 384 aaKnown RBP5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 SCINQ9Y6U3 715 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 TIMM23O14925 209 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 LDLRAD4O15165 306 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 SH3BP5O60239 455 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 KCNJ13O60928 360 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 SEC14L2O76054 403 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 CH25HO95992 272 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 CD53P19397 219 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 GPTP24298 496 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 MPP1Q00013 466 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 GOLGA8DPQ0D2H9 430 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 GRIK3Q13003 919 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 SHBQ15464 509 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 TSTQ16762 297 aaKnown RBP5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 C8orf82Q6P1X6 216 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 DSTYKQ6XUX3 929 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 ZDHHC17Q8IUH5 632 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 DIS3L2Q8IYB7 885 aaKnown RBP5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 BEST2Q8NFU1 509 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 ETNPPLQ8TBG4 499 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 ELP5Q8TE02 316 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 ADAMTS14Q8WXS8 1223 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 HDAC2Q92769 488 aaKnown RBP5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 EVI5LQ96CN4 794 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 LRFN5Q96NI6 719 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 CAMK1GQ96NX5 476 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 RANBP17Q9H2T7 1088 aaKnown RBP5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 HIPK2Q9H2X6 1198 aa5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 LSM4Q9Y4Z0 139 aaKnown RBP5.02□□□□□ -1.61
HMGB1P38-201ENST00000490557 UTYO14607 1347 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 LINC01553A4QN01 128 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 NPIPB11E5RHQ5 1161 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 SEC14L5O43304 696 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 WDHD1O75717 1129 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 TBX18O95935 607 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 NGFRP08138 427 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 MMP2P08253 660 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 KRT10P13645 584 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 PIGAP37287 484 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 MXI1P50539 228 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 RPL7AP62424 266 aaKnown RBP5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 SORDQ00796 357 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 DCTN2Q13561 401 aaKnown RBP5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 CDC73Q6P1J9 531 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 NOXA1Q86UR1 476 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 GLCCI1Q86VQ1 547 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 AADATQ8N5Z0 425 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 B4GALNT2Q8NHY0 566 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 FAM216AQ8WUB2 273 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 NEUROG1Q92886 237 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 SNAPC3Q92966 411 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 GTF3C6Q969F1 213 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 ERGIC1Q969X5 290 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 MTBPQ96DY7 904 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 C7orf26Q96N11 449 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 NR1H4Q96RI1 486 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 SLC25A33Q9BSK2 321 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 OLA1Q9NTK5 396 aaKnown RBP5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 AASSQ9UDR5 926 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 HAO1Q9UJM8 370 aa5.01□□□□□ -1.61
HMGB1P38-201ENST00000490557 KDM3AQ9Y4C1 1321 aa5□□□□□ -1.61
HMGB1P38-201ENST00000490557 DYTNA2CJ06 578 aa5□□□□□ -1.61
HMGB1P38-201ENST00000490557 KLK8O60259 260 aa5□□□□□ -1.61
HMGB1P38-201ENST00000490557 SEC31AO94979 1220 aaKnown RBP5□□□□□ -1.61
HMGB1P38-201ENST00000490557 CCNDBP1O95273 360 aa5□□□□□ -1.61
HMGB1P38-201ENST00000490557 CD4P01730 458 aa5□□□□□ -1.61
HMGB1P38-201ENST00000490557 HOXB5P09067 269 aa5□□□□□ -1.61
HMGB1P38-201ENST00000490557 THBS3P49746 956 aa5□□□□□ -1.61
HMGB1P38-201ENST00000490557 PEX5P50542 639 aa5□□□□□ -1.61
HMGB1P38-201ENST00000490557 RALBP1Q15311 655 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms