RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 KLHL32Q96NJ5 620 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 PEBP4Q96S96 227 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 KLF6Q99612 283 aaPredicted RBP10.48□□□□□ -0.73
TTC28-207ENST00000490475 THSD1Q9NS62 852 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 NDFIP2Q9NV92 336 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 UCKL1Q9NWZ5 548 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 CTTNBP2NLQ9P2B4 639 aa10.48□□□□□ -0.73
TTC28-207ENST00000490475 EME2A4GXA9 379 aaPredicted RBP10.47□□□□□ -0.73
TTC28-207ENST00000490475 MYO1FO00160 1098 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 CREB3O43889 395 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 PRPSAP2O60256 369 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 BRINP1O60477 761 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 LRCH4O75427 683 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 TMCC1O94876 653 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 ANXA6P08133 673 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 ALPIP09923 528 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 NFKBIAP25963 317 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 IL1R2P27930 398 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 NDST2P52849 883 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 SERINC3Q13530 473 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 FGL2Q14314 439 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 NR0B2Q15466 257 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 ESRP1Q6NXG1 681 aaKnown RBP10.47□□□□□ -0.73
TTC28-207ENST00000490475 ERAP2Q6P179 960 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 BRAT1Q6PJG6 821 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 LVRNQ6Q4G3 990 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 MACC1Q6ZN28 852 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 CYP4V2Q6ZWL3 525 aaPredicted RBP10.47□□□□□ -0.73
TTC28-207ENST00000490475 CPNE8Q86YQ8 564 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 FSTL5Q8N475 847 aaPredicted RBP10.47□□□□□ -0.73
TTC28-207ENST00000490475 SPC24Q8NBT2 197 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 OR6C4Q8NGE1 309 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 IFI44Q8TCB0 444 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 CTNNBL1Q8WYA6 563 aaPredicted RBP10.47□□□□□ -0.73
TTC28-207ENST00000490475 CENPTQ96BT3 561 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 ZNF641Q96N77 438 aaPredicted RBP10.47□□□□□ -0.73
TTC28-207ENST00000490475 TUBGCP5Q96RT8 1024 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 LGMNQ99538 433 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 DHX35Q9H5Z1 703 aaKnown RBP10.47□□□□□ -0.73
TTC28-207ENST00000490475 POLR1BQ9H9Y6 1135 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 APOBEC3BQ9UH17 382 aaKnown RBP10.47□□□□□ -0.73
TTC28-207ENST00000490475 ANAPC7Q9UJX3 599 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 NEU3Q9UQ49 428 aa10.47□□□□□ -0.73
TTC28-207ENST00000490475 CFAP69A5D8W1 941 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 ARHGAP42A6NI28 874 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 RASA4BC9J798 803 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 LMO7DNF2Z398 122 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 TMX2-CTNND1H3BSU7 103 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 RASA4O43374 803 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 TLX3O43711 291 aaPredicted RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 TMEM253P0C7T8 217 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 GIMD1P0DJR0 217 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 RBMS1P29558 406 aaKnown RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 ABL2P42684 1182 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 MAGEA1P43355 309 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 POLR2LP62875 67 aaKnown RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 PPARDQ03181 441 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 PIGHQ14442 188 aaPredicted RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 RFTN1Q14699 578 aaPredicted RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 ELOCQ15369 112 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 TMCO4Q5TGY1 634 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 TXNRD3NBQ6F5E7 133 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 RBM44Q6ZP01 1051 aaKnown RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 GPR155Q7Z3F1 870 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 PSTKQ8IV42 348 aaKnown RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 SLC35G2Q8TBE7 412 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 ZNF564Q8TBZ8 553 aaPredicted RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 LMX1AQ8TE12 382 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 PANX2Q96RD6 677 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 KCTD15Q96SI1 283 aaPredicted RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 SNRNP25Q9BV90 132 aaKnown RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 DPH1Q9BZG8 443 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 PRORYQ9H606 182 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 ZWILCHQ9H900 591 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 KCTD5Q9NXV2 234 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 UBA2Q9UBT2 640 aaPredicted RBP10.46□□□□□ -0.73
TTC28-207ENST00000490475 IP6K2Q9UHH9 426 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 TFR2Q9UP52 801 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 AP4E1Q9UPM8 1137 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 DOLKQ9UPQ8 538 aa10.46□□□□□ -0.73
TTC28-207ENST00000490475 CELSR3Q9NYQ7 3312 aa10.46□□□□□ -0.74
TTC28-207ENST00000490475 A0A1W2PQ67 120 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 SOWAHDA6NJG2 315 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 ATXN7O15265 892 aaPredicted RBP10.45□□□□□ -0.74
TTC28-207ENST00000490475 RAD51BO15315 384 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 USP12O75317 370 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 CSO75390 466 aaKnown RBP10.45□□□□□ -0.74
TTC28-207ENST00000490475 HOXB3P14651 431 aaPredicted RBP10.45□□□□□ -0.74
TTC28-207ENST00000490475 KELP23276 732 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 SERPINA4P29622 427 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 CDC25BP30305 580 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 PCK1P35558 622 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 SSR1P43307 286 aaKnown RBP10.45□□□□□ -0.74
TTC28-207ENST00000490475 CSNK1DP48730 415 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 RENBPP51606 427 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 TMPRSS3P57727 454 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 TPI1P60174 286 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 GABREP78334 506 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 C19orf57Q0VDD7 668 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 LRRC14Q15048 493 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms