RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 JUNDP17535 347 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 HTR1BP28222 390 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 MMP13P45452 471 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 LIG3P49916 1009 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 MMRN1Q13201 1228 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 DPYSL3Q14195 570 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 MESDQ14696 234 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 IRF4Q15306 451 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 PROX2Q3B8N5 592 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 ODF2Q5BJF6 829 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 RALGPS1Q5JS13 557 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 TIGD7Q6NT04 549 aaPredicted RBP17.57■□□□□ 0.4
SEC13-218ENST00000490283 TP53I13Q8NBR0 393 aaPredicted RBP17.57■□□□□ 0.4
SEC13-218ENST00000490283 ZNF548Q8NEK5 533 aaPredicted RBP17.57■□□□□ 0.4
SEC13-218ENST00000490283 ATL2Q8NHH9 583 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 FAM71BQ8TC56 605 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 PDCD6IPQ8WUM4 868 aaKnown RBP17.57■□□□□ 0.4
SEC13-218ENST00000490283 ECHDC3Q96DC8 303 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 NUDCD1Q96RS6 583 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 SLC13A1Q9BZW2 595 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 SPASTQ9UBP0 616 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 COQ6Q9Y2Z9 468 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 MUSKO15146 869 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 AQP9O43315 295 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 PRKCGP05129 697 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 CD48P09326 243 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 JUPP14923 745 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 ACP1P24666 158 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 PEX5P50542 639 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 BLKP51451 505 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 DUSP3P51452 185 aaPredicted RBP17.56■□□□□ 0.4
SEC13-218ENST00000490283 ANKRD20A8PQ5CZ79 823 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 MACC1Q6ZN28 852 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 SLC35G2Q8TBE7 412 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 LMX1AQ8TE12 382 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 ZNF830Q96NB3 372 aaPredicted RBP17.56■□□□□ 0.4
SEC13-218ENST00000490283 CHP1Q99653 195 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 MGME1Q9BQP7 344 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 CCDC86Q9H6F5 360 aaKnown RBP17.56■□□□□ 0.4
SEC13-218ENST00000490283 USP29Q9HBJ7 922 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 MBNL1Q9NR56 388 aaKnown RBP17.56■□□□□ 0.4
SEC13-218ENST00000490283 SPTLC3Q9NUV7 552 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 NCKIPSDQ9NZQ3 722 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 APOBEC3BQ9UH17 382 aaKnown RBP17.56■□□□□ 0.4
SEC13-218ENST00000490283 CSNK1G3Q9Y6M4 447 aa17.56■□□□□ 0.4
SEC13-218ENST00000490283 MFSD11O43934 449 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 CPP00450 1065 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 PCCBP05166 539 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 KRT10P13645 584 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 MX2P20592 715 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 IL4RP24394 825 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 GARSP41250 739 aaKnown RBP17.55■□□□□ 0.4
SEC13-218ENST00000490283 ARHGAP25P42331 645 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 E2F1Q01094 437 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 PPARDQ03181 441 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 ITKQ08881 620 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 PAFAH1B3Q15102 231 aaKnown RBP17.55■□□□□ 0.4
SEC13-218ENST00000490283 AGERQ15109 404 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 WSCD2Q2TBF2 565 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 ATP13A4Q4VNC1 1196 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 FAXCQ5TGI0 409 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 SARM1Q6SZW1 724 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 DPPA4Q7L190 304 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 ZSWIM9Q86XI8 627 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 PHACTR4Q8IZ21 702 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 NDUFAF2Q8N183 169 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 RFFLQ8WZ73 363 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 GLMNQ92990 594 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 IL12RB2Q99665 862 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 NT5MQ9NPB1 228 aa17.55■□□□□ 0.4
SEC13-218ENST00000490283 DOCK9Q9BZ29 2069 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 FAM149AA5PLN7 773 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 K7ESM1 405 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 TRAFD1O14545 582 aaPredicted RBP17.54■□□□□ 0.4
SEC13-218ENST00000490283 PEX11BO96011 259 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 CKMT1AP12532 417 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 ARSEP51690 589 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 TAS2R40P59535 323 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 SEMG2Q02383 582 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 GALNT2Q10471 571 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 EIF2B5Q13144 721 aaKnown RBP17.54■□□□□ 0.4
SEC13-218ENST00000490283 MTM1Q13496 603 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 IFI16Q16666 785 aaKnown RBP17.54■□□□□ 0.4
SEC13-218ENST00000490283 HES3Q5TGS1 186 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 NCBP2-AS2Q69YL0 99 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 ZCCHC8Q6NZY4 707 aaKnown RBP17.54■□□□□ 0.4
SEC13-218ENST00000490283 PDCD7Q8N8D1 485 aaKnown RBP17.54■□□□□ 0.4
SEC13-218ENST00000490283 PCDH19Q8TAB3 1148 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.54■□□□□ 0.4
SEC13-218ENST00000490283 TBATAQ96M53 351 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 POLR1EQ9GZS1 481 aaKnown RBP17.54■□□□□ 0.4
SEC13-218ENST00000490283 NOD2Q9HC29 1040 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 KCTD5Q9NXV2 234 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 INTUQ9ULD6 942 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 PCDHGC4Q9Y5F7 938 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 CACNA1BQ00975 2339 aa17.54■□□□□ 0.4
SEC13-218ENST00000490283 LRRD1A4D1F6 860 aa17.53■□□□□ 0.4
SEC13-218ENST00000490283 CACNB4O00305 520 aaPredicted RBP17.53■□□□□ 0.4
SEC13-218ENST00000490283 HTRA2O43464 458 aaPredicted RBP17.53■□□□□ 0.4
SEC13-218ENST00000490283 RECQL5O94762 991 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms