RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 GYPCP04921 128 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 HOXC4P09017 264 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 RARAP10276 462 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 JUNDP17535 347 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 HNF1BP35680 557 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 MMP12P39900 470 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 ARSEP51690 589 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 CLDN6P56747 220 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 AP1S1P61966 158 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 SLC25A11Q02978 314 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 SLC10A7Q0GE19 358 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 PDE1CQ14123 709 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 PTK2BQ14289 1009 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 ASTE1Q2TB18 679 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 CCDC157Q569K6 752 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 LRRC73Q5JTD7 316 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 TMCO4Q5TGY1 634 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 TXNRD3NBQ6F5E7 133 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 ZCCHC8Q6NZY4 707 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 MACC1Q6ZN28 852 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 ARHGAP36Q6ZRI8 547 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 ZNF354CQ86Y25 554 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 SDR16C5Q8N3Y7 309 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 BTN2A2Q8WVV5 523 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 CSPG4P5Q96PW8 444 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 C1QTNF7Q9BXJ2 289 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 THAP2Q9H0W7 228 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 ETNK2Q9NVF9 386 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 NCKIPSDQ9NZQ3 722 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 RCOR3Q9P2K3 495 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 SEPT3Q9UH03 358 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 CLCA2Q9UQC9 943 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 ATP8A1Q9Y2Q0 1164 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 MYLKQ15746 1914 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 EME2A4GXA9 379 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 H3BM21 787 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 H3BRJ5 948 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 FFAR2O15552 330 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 DAPK3O43293 454 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 AQP9O43315 295 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 GCATO75600 419 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 NEBLO76041 1014 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 MT-CO3P00414 261 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 ALPPL2P10696 532 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 C6P13671 934 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 GM2AP17900 193 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 AMPD1P23109 780 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 TRIM23P36406 574 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 HSPA9P38646 679 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 EIF4A3P38919 411 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 LIG3P49916 1009 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 DUSP3P51452 185 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 RENBPP51606 427 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 POLR2LP62875 67 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 LRRC14Q15048 493 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 IRF4Q15306 451 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 ZSCAN23Q3MJ62 389 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 PPP6R3Q5H9R7 873 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 C6orf132Q5T0Z8 1188 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 ALKBH5Q6P6C2 394 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 LVRNQ6Q4G3 990 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 LIPIQ6XZB0 460 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 VPS36Q86VN1 386 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 LRRC49Q8IUZ0 686 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 PGBD5Q8N414 524 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 TEX26Q8N6G2 289 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 CXorf40AQ8TE69 158 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 FATE1Q969F0 183 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 NXPE2Q96DL1 559 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 WRAP53Q9BUR4 548 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 LRRC61Q9BV99 259 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 CLPBQ9H078 707 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 TCEAL2Q9H3H9 227 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 ATP13A3Q9H7F0 1226 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 ZWILCHQ9H900 591 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 PCDH18Q9HCL0 1135 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 MYO1AQ9UBC5 1043 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 SPASTQ9UBP0 616 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 IP6K2Q9UHH9 426 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 RALYQ9UKM9 306 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 LUC7L2Q9Y383 392 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 PPIL1Q9Y3C6 166 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 RP1P56715 2156 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 ADAMTS20P59510 1910 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 PTPRQQ9UMZ3 2332 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 ATRXP46100 2492 aa9.79□□□□□ -0.84
TMEM39A-210ENST00000490099 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 A0A1W2PQ67 120 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 YY2O15391 372 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 SOCS5O75159 536 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 MYF5P13349 255 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 SERPINA4P29622 427 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 THOP1P52888 689 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 TPM4P67936 248 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 DAB2P98082 770 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 MTM1Q13496 603 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 INPP5AQ14642 412 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 LBRQ14739 615 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms