RNA–Protein interactions for RNA: ENST00000489344.5

RBM3-208, Transcript of RNA binding motif protein 3, human

TSL 2

Gene RBM3, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-208	ENST00000489344	E4F1	Q66K89	784 aa	Predicted RBP	14	□□□□□ -0.17
RBM3-208	ENST00000489344	TRIM72	Q6ZMU5	477 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	MACC1	Q6ZN28	852 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	TMEM110	Q86TL2	294 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	CCNJL	Q8IV13	435 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	HID1	Q8IV36	788 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	DEFB106A	Q8N104	65 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	FSTL5	Q8N475	847 aa	Predicted RBP	14	□□□□□ -0.17
RBM3-208	ENST00000489344	DCAF4L2	Q8NA75	395 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	C1orf131	Q8NDD1	294 aa	Known RBP	14	□□□□□ -0.17
RBM3-208	ENST00000489344	OR8K1	Q8NGG5	319 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	ASB12	Q8WXK4	309 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	PCDHB18P	Q96TA0	734 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	HAUS4	Q9H6D7	363 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	ZDHHC6	Q9H6R6	413 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	PLAA	Q9Y263	795 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	BZW2	Q9Y6E2	419 aa	Known RBP	14	□□□□□ -0.17
RBM3-208	ENST00000489344	DOCK4	Q8N1I0	1966 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	LRP4	O75096	1905 aa		14	□□□□□ -0.17
RBM3-208	ENST00000489344	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	LSM8	O95777	96 aa	Known RBP	13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	ALPI	P09923	528 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	CTSE	P14091	401 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	CD82	P27701	267 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	EIF4A3	P38919	411 aa	Known RBP	13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	CCNH	P51946	323 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	SNX16	P57768	344 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	YPEL5	P62699	121 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	ZFP36L1	Q07352	338 aa	Known RBP	13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	NME3	Q13232	169 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	PDCL	Q13371	301 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	TSR1	Q2NL82	804 aa	Known RBP	13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	C5orf22	Q49AR2	442 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	PHF19	Q5T6S3	580 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	OR7D4	Q8NG98	312 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	CPA5	Q8WXQ8	436 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	TSACC	Q96A04	125 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	TMEM159	Q96B96	161 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	CENPT	Q96BT3	561 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	CPXM1	Q96SM3	734 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	CMKLR1	Q99788	373 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	SEPT11	Q9NVA2	429 aa	Known RBP	13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	KCNK4	Q9NYG8	393 aa		13.99	□□□□□ -0.17
RBM3-208	ENST00000489344	ABCA12	Q86UK0	2595 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	GOLGA6L3	A6NEY3	463 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	C16orf96	A6NNT2	1141 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	ENO4	A6NNW6	628 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	GRAP2	O75791	330 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	SERPING1	P05155	500 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	UNG	P13051	313 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	HNRNPH3	P31942	346 aa	Known RBP	13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	CCR10	P46092	362 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	ATP1A2	P50993	1020 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	BLK	P51451	505 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	HK3	P52790	923 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	NOMO3	P69849	1222 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	CARD16	Q5EG05	197 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	NAA35	Q5VZE5	725 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	HGSNAT	Q68CP4	663 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	LVRN	Q6Q4G3	990 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	RD3	Q7Z3Z2	195 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	TFAP2D	Q7Z6R9	452 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	DRC7	Q8IY82	874 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	PCDH20	Q8N6Y1	951 aa	Known RBP	13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	OR6C4	Q8NGE1	309 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	RAB7B	Q96AH8	199 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	SLC2A13	Q96QE2	648 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	SYT11	Q9BT88	431 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	SPON2	Q9BUD6	331 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	MBNL1	Q9NR56	388 aa	Known RBP	13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	TUBD1	Q9UJT1	453 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	FCF1	Q9Y324	198 aa	Known RBP	13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	SNX10	Q9Y5X0	201 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	RNF215	Q9Y6U7	377 aa		13.98	□□□□□ -0.17
RBM3-208	ENST00000489344	DOPEY1	Q5JWR5	2465 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	STMND1	H3BQB6	276 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	MFAP3L	O75121	409 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	CDC25B	P30305	580 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	GK	P32189	559 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	GABRB2	P47870	512 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	SERPINH1	P50454	418 aa	Known RBP	13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	MTA1	Q13330	715 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	C16orf72	Q14CZ0	275 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	CLEC16A	Q2KHT3	1053 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	ALG11	Q2TAA5	492 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	PTPN20	Q4JDL3	420 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	TDRD12	Q587J7	1177 aa	Known RBP	13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	LRRC73	Q5JTD7	316 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	TMEM164	Q5U3C3	297 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	RETSAT	Q6NUM9	610 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	TMPRSS9	Q7Z410	1059 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	SETD3	Q86TU7	594 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	GKN2	Q86XP6	184 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	CNGA4	Q8IV77	575 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	RYBP	Q8N488	228 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	MSANTD4	Q8NCY6	345 aa		13.97	□□□□□ -0.17
RBM3-208	ENST00000489344	OR6K2	Q8NGY2	324 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms