RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 DKK3Q9UBP4 350 aa16.03■□□□□ 0.16
ERGIC3-217ENST00000488935 MFHAS1Q9Y4C4 1052 aa16.03■□□□□ 0.16
ERGIC3-217ENST00000488935 KALRNO60229 2985 aa16.03■□□□□ 0.16
ERGIC3-217ENST00000488935 ARHGEF17Q96PE2 2063 aaPredicted RBP16.03■□□□□ 0.16
ERGIC3-217ENST00000488935 TEX51A0A1B0GUA7 166 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 WASH4PA8MWX3 477 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 DFFAO00273 331 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 RIOK3O14730 519 aaKnown RBP16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 DXOO77932 396 aaKnown RBP16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 TNFSF15O95150 251 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 CTSEP14091 401 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 PSMA2P25787 234 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 HK3P52790 923 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 YBEYP58557 167 aaPredicted RBP16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 YPEL5P62699 121 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 SRSF6Q13247 344 aaKnown RBP16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 NCAPHQ15003 741 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 PTPRRQ15256 657 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 LSMEM2Q8N112 164 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 UMODL1-AS1Q8N2C9 162 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 SDR16C5Q8N3Y7 309 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 OR1E3Q8WZA6 343 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 PDXPQ96GD0 296 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 CPEB1Q9BZB8 566 aaKnown RBP16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 EPB41L5Q9HCM4 733 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 GPR34Q9UPC5 381 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 AP4E1Q9UPM8 1137 aa16.02■□□□□ 0.16
ERGIC3-217ENST00000488935 HELZ2Q9BYK8 2649 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 ANKRD62A6NC57 917 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 EEF2KO00418 725 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 PRAMEF11O60813 436 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 TNFAIP3P21580 790 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 RPIAP49247 311 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 TMPRSS3P57727 454 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 ERVPABLB-1P60509 514 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 SRP54P61011 504 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 CFHR1Q03591 330 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 SPIDRQ14159 915 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 ZSCAN23Q3MJ62 389 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 PARP15Q460N3 678 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 BROXQ5VW32 411 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 ESRP1Q6NXG1 681 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 SASS6Q6UVJ0 657 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 IRF2BP2Q7Z5L9 587 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 SRLQ86TD4 932 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 ZSCAN30Q86W11 494 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 AOPEPQ8N6M6 819 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 NPWQ8N729 165 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 CCL4L1Q8NHW4 92 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 GLMNQ92990 594 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 SNRNP25Q9BV90 132 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 C1QTNF7Q9BXJ2 289 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 EDEM3Q9BZQ6 932 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 RETREG1Q9H6L5 497 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 THSD1Q9NS62 852 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 KLQ9UEF7 1012 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 MOSPD1Q9UJG1 213 aa16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 ATXN7L1Q9ULK2 861 aaPredicted RBP16.01■□□□□ 0.15
ERGIC3-217ENST00000488935 A0A0U1RQS6 177 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 CXorf51AA0A1B0GTR3 108 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 A0A1W2PQM1 296 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 TMEM202A6NGA9 273 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 PALMO75781 387 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 RPLP0P05388 317 aaKnown RBP16■□□□□ 0.15
ERGIC3-217ENST00000488935 PLA2G2AP14555 144 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 MMP12P39900 470 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 MYL5Q02045 173 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 ELP6Q0PNE2 266 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 RALGDSQ12967 914 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 MAMLD1Q13495 774 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 NFATC4Q14934 902 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 TGIF1Q15583 401 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 PPP6R3Q5H9R7 873 aaPredicted RBP16■□□□□ 0.15
ERGIC3-217ENST00000488935 CFAP58Q5T655 872 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 RBM43Q6ZSC3 357 aaKnown RBP16■□□□□ 0.15
ERGIC3-217ENST00000488935 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 PAF1Q8N7H5 531 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 CASKIN2Q8WXE0 1202 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 ERGIC2Q96RQ1 377 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 LGR4Q9BXB1 951 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 ATP8A1Q9Y2Q0 1164 aa16■□□□□ 0.15
ERGIC3-217ENST00000488935 TSPAN11A1L157 253 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 NTN3O00634 580 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 DAPK3O43293 454 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 RECQL5O94762 991 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 RASGRP1O95267 797 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 GM2AP17900 193 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 ERCC2P18074 760 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 ELOCQ15369 112 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 E4F1Q66K89 784 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 DENND2CQ68D51 928 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 ERAP2Q6P179 960 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 CYP4V2Q6ZWL3 525 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 ZNF605Q86T29 641 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 JAMLQ86YT9 394 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 ARL10Q8N8L6 244 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 ANKRD20A12PQ8NF67 263 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 TPCN2Q8NHX9 752 aa15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 WDR36Q8NI36 951 aaKnown RBP15.99■□□□□ 0.15
ERGIC3-217ENST00000488935 SYT11Q9BT88 431 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms