RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PROX2Q3B8N5 592 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 ZFYVE27Q5T4F4 411 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 TMPRSS7Q7RTY8 843 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 MARCH9Q86YJ5 346 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 BBS5Q8N3I7 341 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 GALNT15Q8N3T1 639 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 OR4C6Q8NH72 309 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 PCDH19Q8TAB3 1148 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 SLC35G2Q8TBE7 412 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 NSMCE1Q8WV22 266 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 TRIM5Q9C035 493 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 SCUBE2Q9NQ36 999 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 PTPRBP23467 1997 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 DMXL2Q8TDJ6 3036 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 CACNA1BQ00975 2339 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.86■□□□□ 0.45
ITGB1-215ENST00000488494 FAM149AA5PLN7 773 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 TRAFD1O14545 582 aaPredicted RBP17.86■□□□□ 0.45
ITGB1-215ENST00000488494 MAP3K6O95382 1288 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 CSF2P04141 144 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 CR2P20023 1033 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 GARSP41250 739 aaKnown RBP17.86■□□□□ 0.45
ITGB1-215ENST00000488494 CLDN6P56747 220 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 MAXP61244 160 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 GALNT2Q10471 571 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 RALGDSQ12967 914 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 EIF2B5Q13144 721 aaKnown RBP17.86■□□□□ 0.45
ITGB1-215ENST00000488494 ZNF211Q13398 564 aaPredicted RBP17.86■□□□□ 0.45
ITGB1-215ENST00000488494 LRRC14Q15048 493 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 PAFAH1B3Q15102 231 aaKnown RBP17.86■□□□□ 0.45
ITGB1-215ENST00000488494 PDK2Q15119 407 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 SMAD1Q15797 465 aaKnown RBP17.86■□□□□ 0.45
ITGB1-215ENST00000488494 HS1BP3Q53T59 392 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 ANKRD20A8PQ5CZ79 823 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 MARC1Q5VT66 337 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 RBFAQ8N0V3 343 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 KDF1Q8NAX2 398 aaPredicted RBP17.86■□□□□ 0.45
ITGB1-215ENST00000488494 RFFLQ8WZ73 363 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 NUDCD1Q96RS6 583 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 NOD2Q9HC29 1040 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 KLF15Q9UIH9 416 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 ZMIZ1Q9ULJ6 1067 aa17.86■□□□□ 0.45
ITGB1-215ENST00000488494 LZTS3O60299 673 aaPredicted RBP17.85■□□□□ 0.45
ITGB1-215ENST00000488494 SOCS5O75159 536 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 NEBLO76041 1014 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 CPP00450 1065 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 PCCBP05166 539 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 ELFN1P0C7U0 828 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 ALPPL2P10696 532 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 JUNDP17535 347 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 CKMT2P17540 419 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 WSCD2Q2TBF2 565 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 LRRK1Q38SD2 2015 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 MACC1Q6ZN28 852 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 DPPA4Q7L190 304 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 MAP7D3Q8IWC1 876 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 RHOT2Q8IXI1 618 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 PDCD6IPQ8WUM4 868 aaKnown RBP17.85■□□□□ 0.45
ITGB1-215ENST00000488494 FAF2Q96CS3 445 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 NT5MQ9NPB1 228 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 NLGN3Q9NZ94 848 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 APOBEC3BQ9UH17 382 aaKnown RBP17.85■□□□□ 0.45
ITGB1-215ENST00000488494 PCDHGC4Q9Y5F7 938 aa17.85■□□□□ 0.45
ITGB1-215ENST00000488494 LRRD1A4D1F6 860 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 HTRA2O43464 458 aaPredicted RBP17.84■□□□□ 0.45
ITGB1-215ENST00000488494 MTA2O94776 668 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 C1SP09871 688 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 GIMD1P0DJR0 217 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 YPEL5P62699 121 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 POLR2LP62875 67 aaKnown RBP17.84■□□□□ 0.45
ITGB1-215ENST00000488494 DAB2P98082 770 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 GBE1Q04446 702 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 TRAF2Q12933 501 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 PTK2BQ14289 1009 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 LRRC49Q8IUZ0 686 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 PHACTR4Q8IZ21 702 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 PQLC3Q8N755 202 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 RAPGEF5Q92565 580 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 TCEAL2Q9H3H9 227 aaPredicted RBP17.84■□□□□ 0.45
ITGB1-215ENST00000488494 B4GALT6Q9UBX8 382 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 PNMA8BQ9ULN7 279 aaPredicted RBP17.84■□□□□ 0.45
ITGB1-215ENST00000488494 SHROOM3Q8TF72 1996 aa17.84■□□□□ 0.45
ITGB1-215ENST00000488494 PLXNB3Q9ULL4 1909 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 NEMP2A6NFY4 417 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 A8MX80 341 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 K7ESM1 405 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 TOR1BO14657 336 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 SCAMP1O15126 338 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 AQP9O43315 295 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 KRT37O76014 449 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 ACP1P24666 158 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 ILKQ13418 452 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 HES3Q5TGS1 186 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 TIGD7Q6NT04 549 aaPredicted RBP17.83■□□□□ 0.44
ITGB1-215ENST00000488494 TEX26Q8N6G2 289 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 TC2NQ8N9U0 490 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 LMX1AQ8TE12 382 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 LRRN4Q8WUT4 740 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 SPOCK2Q92563 424 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 LRRC61Q9BV99 259 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms