RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ITM2AO43736 263 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 CEP104O60308 925 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 ADAP00813 363 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 ALPLP05186 524 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 TGFB3P10600 412 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 NAGAP17050 411 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 CD58P19256 250 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 TKTP29401 623 aaKnown RBP4.56□□□□□ -1.68
ITGB1-214ENST00000488427 CENPAP49450 140 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 HLFQ16534 295 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 NFIL3Q16649 462 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 PLEKHO1Q53GL0 409 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-214ENST00000488427 SH2D4BQ5SQS7 431 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 KLHL24Q6TFL4 600 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 FAM83HQ6ZRV2 1179 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-214ENST00000488427 DENND6AQ8IWF6 608 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 C9orf106Q8NAJ2 232 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 C11orf65Q8NCR3 313 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 OR14A16Q8NHC5 309 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 ATOH1Q92858 354 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-214ENST00000488427 GPR63Q9BZJ6 419 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 CDT1Q9H211 546 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 BEX4Q9NWD9 120 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-214ENST00000488427 PLEKHB1Q9UF11 243 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-214ENST00000488427 PCDHGB5Q9Y5G0 923 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 TTC3P53804 2025 aa4.56□□□□□ -1.68
ITGB1-214ENST00000488427 ADGRL3Q9HAR2 1447 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 KIAA1107Q9UPP5 1409 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 XRN1Q8IZH2 1706 aaKnown RBP4.55□□□□□ -1.68
ITGB1-214ENST00000488427 CHL1O00533 1208 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 PER2O15055 1255 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 GLUD1P00367 558 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 IRF1P10914 325 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 CKMT1AP12532 417 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 GNLYP22749 145 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 LIFRP42702 1097 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 PPP3CCP48454 512 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 GLUD2P49448 558 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 THBS3P49746 956 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 HTR6P50406 440 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 NUDT6P53370 316 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 LINC00205P59089 165 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 RUNX2Q13950 521 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 CAMK1Q14012 370 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 GPR68Q15743 365 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 ME3Q16798 604 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 C8orf82Q6P1X6 216 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-214ENST00000488427 TMEM71Q6P5X7 295 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 CTU1Q7Z7A3 348 aaKnown RBP4.55□□□□□ -1.68
ITGB1-214ENST00000488427 ADHFE1Q8IWW8 467 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 SUGP1Q8IWZ8 645 aaKnown RBP4.55□□□□□ -1.68
ITGB1-214ENST00000488427 MCPH1Q8NEM0 835 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 OR4N2Q8NGD1 307 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 ELP5Q8TE02 316 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 GDPD5Q8WTR4 605 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 POLDIP3Q9BY77 421 aaKnown RBP4.55□□□□□ -1.68
ITGB1-214ENST00000488427 INTS2Q9H0H0 1204 aaKnown RBP4.55□□□□□ -1.68
ITGB1-214ENST00000488427 RRN3Q9NYV6 651 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 GTF2A1LQ9UNN4 478 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 C1orf167Q5SNV9 1468 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 COL24A1Q17RW2 1714 aa4.55□□□□□ -1.68
ITGB1-214ENST00000488427 PIK3R4Q99570 1358 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 PLEKHG1Q9ULL1 1385 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 TARSL2A2RTX5 802 aaKnown RBP4.54□□□□□ -1.68
ITGB1-214ENST00000488427 RRN3P2A6NIE6 340 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 C17orf100A8MU93 164 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 KDM4EB2RXH2 506 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-214ENST00000488427 NCAM2O15394 837 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 HOXC11O43248 304 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-214ENST00000488427 RGS14O43566 566 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 CLDN7O95471 211 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 TFPIP10646 304 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 CTPS1P17812 591 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 POU1F1P28069 291 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 FAM27E3Q08E93 113 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 GPS2Q13227 327 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 PKP1Q13835 747 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 TDRD12Q587J7 1177 aaKnown RBP4.54□□□□□ -1.68
ITGB1-214ENST00000488427 PELI3Q8N2H9 469 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 LSM14AQ8ND56 463 aaKnown RBP4.54□□□□□ -1.68
ITGB1-214ENST00000488427 RASSF8Q8NHQ8 419 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 FAM216AQ8WUB2 273 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 OIT3Q8WWZ8 545 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 PHF21BQ96EK2 531 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 MAELQ96JY0 434 aaKnown RBP4.54□□□□□ -1.68
ITGB1-214ENST00000488427 TBATAQ96M53 351 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 EYA3Q99504 573 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 ZPBPQ9BS86 351 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.54□□□□□ -1.68
ITGB1-214ENST00000488427 LHPPQ9H008 270 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 HIPK2Q9H2X6 1198 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 CXorf56Q9H5V9 222 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 VEZTQ9HBM0 779 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 BABAM1Q9NWV8 329 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 ANKRD10Q9NXR5 420 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 CARD8Q9Y2G2 431 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 GCC2Q8IWJ2 1684 aa4.54□□□□□ -1.68
ITGB1-214ENST00000488427 EIF2AK4Q9P2K8 1649 aaKnown RBP4.54□□□□□ -1.68
ITGB1-214ENST00000488427 FAM90A7PA6NKC0 464 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms