RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 DNAJB1P25685 340 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 ST13P50502 369 aaKnown RBP6.4□□□□□ -1.39
SIK3-212ENST00000488337 GALCP54803 685 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 EEF1A1P68104 462 aaKnown RBP6.4□□□□□ -1.39
SIK3-212ENST00000488337 NKX3-2P78367 333 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 OTUD4Q01804 1114 aaKnown RBP6.4□□□□□ -1.39
SIK3-212ENST00000488337 EEF1A2Q05639 463 aaKnown RBP6.4□□□□□ -1.39
SIK3-212ENST00000488337 ILF2Q12905 390 aaKnown RBP6.4□□□□□ -1.39
SIK3-212ENST00000488337 MMRN1Q13201 1228 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 PICALMQ13492 652 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 ERV3-1Q14264 604 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 SUPT20HL1Q3ZLR7 823 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 CYP27C1Q4G0S4 372 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 EEF1A1P5Q5VTE0 462 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 ZNF544Q6NX49 715 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 HHIPL2Q6UWX4 724 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 CREB3L2Q70SY1 520 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 NOXA1Q86UR1 476 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 MICU2Q8IYU8 434 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 CRYBG2Q8N1P7 616 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 URGCPQ8TCY9 931 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 PHF10Q8WUB8 498 aaKnown RBP6.4□□□□□ -1.39
SIK3-212ENST00000488337 ZNF606Q8WXB4 792 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 ZHX1-C8orf76Q96EF9 292 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 SLC10A4Q96EP9 437 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 NTPCRQ9BSD7 190 aaKnown RBP6.4□□□□□ -1.39
SIK3-212ENST00000488337 SYT11Q9BT88 431 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 TRIM8Q9BZR9 551 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 SHARPINQ9H0F6 387 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 TEKT2Q9UIF3 430 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 COPS3Q9UNS2 423 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 MRPS7Q9Y2R9 242 aaKnown RBP6.4□□□□□ -1.39
SIK3-212ENST00000488337 AFG3L2Q9Y4W6 797 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 TP53BP1Q12888 1972 aaPredicted RBP6.4□□□□□ -1.39
SIK3-212ENST00000488337 NHSL1Q5SYE7 1610 aa6.4□□□□□ -1.39
SIK3-212ENST00000488337 A0A1W2PRG0 241 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 TARM1B6A8C7 271 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 CLIC2O15247 247 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 MAN1A2O60476 641 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 APOC1P02654 83 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 MBL2P11226 248 aaPredicted RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 NELFEP18615 380 aaKnown RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 NCF2P19878 526 aaPredicted RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 ACVR2AP27037 513 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 LRPAP1P30533 357 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 ZNF211Q13398 564 aaPredicted RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 GRM7Q14831 915 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 ZMYND11Q15326 602 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 TMED2Q15363 201 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 KNOP1Q1ED39 458 aaKnown RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 ASPRV1Q53RT3 343 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 SEL1L2Q5TEA6 688 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 STEAP3Q658P3 488 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 LIPIQ6XZB0 460 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 PLEKHM3Q6ZWE6 761 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 CATSPER4Q7RTX7 472 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 PIWIL3Q7Z3Z3 882 aaKnown RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 ZBTB46Q86UZ6 589 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 RCOR2Q8IZ40 523 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 KDM1BQ8NB78 822 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 TFB1MQ8WVM0 346 aaKnown RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 ZFP14Q9HCL3 533 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 COQ3Q9NZJ6 369 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 INVSQ9Y283 1065 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 ACTL7AQ9Y615 435 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 KCPQ6ZWJ8 1503 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 ARHGAP42A6NI28 874 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 ABCD4O14678 606 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 ACOT8O14734 319 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 FAM13AO94988 1023 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 CYP17A1P05093 508 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 TIMP2P16035 220 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 RAB3AP20336 220 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 HLA-FP30511 346 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 GDI2P50395 445 aaKnown RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 RAD23AP54725 363 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 BFSP1Q12934 665 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 GPR50Q13585 617 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 SLC12A1Q13621 1099 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 PTK6Q13882 451 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 BMT2Q1RMZ1 405 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 LDLRAP1Q5SW96 308 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 ATG16L1Q676U5 607 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 GDPD3Q7L5L3 318 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 FRMD5Q7Z6J6 570 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 ZBTB33Q86T24 672 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 SCML4Q8N228 414 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 TTLL6Q8N841 843 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 SLC7A14Q8TBB6 771 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 PNPT1Q8TCS8 783 aaKnown RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 ST8SIA2Q92186 375 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 GLT1D1Q96MS3 346 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 KLHL32Q96NJ5 620 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 OR52B2Q96RD2 323 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 NTMT1Q9BV86 223 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 SLC19A3Q9BZV2 496 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 PPCSQ9HAB8 311 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 ANKRD6Q9Y2G4 727 aa6.39□□□□□ -1.39
SIK3-212ENST00000488337 CICQ96RK0 1608 aaPredicted RBP6.39□□□□□ -1.39
SIK3-212ENST00000488337 MEIS1O00470 390 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms