RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MAGOHBQ96A72 148 aaKnown RBP15.85■□□□□ 0.13
C9orf3-219ENST00000488186 RMDN1Q96DB5 314 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 CAPZA3Q96KX2 299 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-219ENST00000488186 PPP1R2P1Q96PQ5 205 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 AP1M1Q9BXS5 423 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 ADGRE3Q9BY15 652 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 USP29Q9HBJ7 922 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 PCDH12Q9NPG4 1184 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 UBP1Q9NZI7 540 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 FAM153AQ9UHL3 310 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 CHKBQ9Y259 395 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 DRG1Q9Y295 367 aaKnown RBP15.85■□□□□ 0.13
C9orf3-219ENST00000488186 PI4KAP42356 2102 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 A0A1W2PQU0 124 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 TSPAN11A1L157 253 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 GOLGA6CA6NDK9 693 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 GOLGA6BA6NDN3 693 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 ZNF185O15231 689 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 PMPCBO75439 489 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 ANXA9O76027 345 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 PGLSO95336 258 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 ITGAVP06756 1048 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 GOLGA6DP0CG33 693 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 GNSP15586 552 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 MAT2AP31153 395 aaKnown RBP15.84■□□□□ 0.13
C9orf3-219ENST00000488186 PTGER3P43115 390 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 CCR5P51681 352 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 GEMP55040 296 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 TAS2R38P59533 333 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 RPS21P63220 83 aaKnown RBP15.84■□□□□ 0.13
C9orf3-219ENST00000488186 SKOR1P84550 965 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 LMNB2Q03252 620 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 USP45Q70EL2 814 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 HORMAD1Q86X24 394 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 SPATA22Q8NHS9 363 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 FAM131CQ96AQ9 280 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 BIRC7Q96CA5 298 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 ECHDC3Q96DC8 303 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 SPATA13Q96N96 652 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 FCRL5Q96RD9 977 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 TDRD1Q9BXT4 1180 aaKnown RBP15.84■□□□□ 0.13
C9orf3-219ENST00000488186 GBA3Q9H227 469 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 GOLGA6AQ9NYA3 693 aa15.84■□□□□ 0.13
C9orf3-219ENST00000488186 AAR2Q9Y312 384 aaKnown RBP15.84■□□□□ 0.13
C9orf3-219ENST00000488186 GCATO75600 419 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 MT-CYBP00156 380 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 TUBB4AP04350 444 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 PRKCGP05129 697 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 MMP2P08253 660 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 CYP2A6P11509 494 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 ITIH2P19823 946 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 MAOBP27338 520 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 CD68P34810 354 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 HOXD12P35452 270 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 ABL2P42684 1182 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 RPL26P61254 145 aaKnown RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 CDK18Q07002 472 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 MPP3Q13368 585 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 SIX1Q15475 284 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 OASLQ15646 514 aaKnown RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 SETMARQ53H47 684 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 KIAA1161Q6NSJ0 714 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 DRICH1Q6PGQ1 229 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 ZSCAN30Q86W11 494 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 SLC41A1Q8IVJ1 513 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 LPCAT1Q8NF37 534 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 ZNF592Q92610 1267 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 KLK6Q92876 244 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 VOPP1Q96AW1 172 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 NSMCE3Q96MG7 304 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 WRAP53Q9BUR4 548 aaKnown RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 FSD1LQ9BXM9 530 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 ARRDC1-AS1Q9H2J1 176 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 VPS45Q9NRW7 570 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 SMARCAL1Q9NZC9 954 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 RNF14Q9UBS8 474 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 EIF2B4Q9UI10 523 aaKnown RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 RPL26L1Q9UNX3 145 aaKnown RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 ITM2BQ9Y287 266 aa15.83■□□□□ 0.12
C9orf3-219ENST00000488186 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-219ENST00000488186 TNRC6BQ9UPQ9 1833 aaKnown RBP15.82■□□□□ 0.12
C9orf3-219ENST00000488186 CACNA1EQ15878 2313 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 A8MX80 341 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 RIOK3O14730 519 aaKnown RBP15.82■□□□□ 0.12
C9orf3-219ENST00000488186 AREL1O15033 823 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 LZTS3O60299 673 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-219ENST00000488186 MMP20O60882 483 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 EPN2O95208 641 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 PDHA1P08559 390 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 CTPS1P17812 591 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 ITPKAP23677 461 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 CD27P26842 260 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 PSMB4P28070 264 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 NUDT1P36639 197 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 KCNJ1P48048 391 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 LMAN1P49257 510 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 ARHGEF7Q14155 803 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 SLC14A2Q15849 920 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 PARP6Q2NL67 630 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms