RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ZP1P60852 638 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 ZXDBP98169 803 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 ST3GAL1Q11201 340 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 EIF4A2Q14240 407 aaKnown RBP3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 TBCEQ15813 527 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 DNTTIP2Q5QJE6 756 aaKnown RBP3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 DCAF12L2Q5VW00 463 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 SLC16A12Q6ZSM3 486 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 MON1BQ7L1V2 547 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 SFTPA2Q8IWL1 248 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 CNTROBQ8N137 903 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 ADSSL1Q8N142 457 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 ZCCHC9Q8N567 271 aaKnown RBP3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 C7orf57Q8NEG2 295 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 MCPH1Q8NEM0 835 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 GJC3Q8NFK1 279 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 GTF3C6Q969F1 213 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 MOAP1Q96BY2 351 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 FBXL8Q96CD0 374 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 LMLNQ96KR4 655 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 HARBI1Q96MB7 349 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 NCAPGQ9BPX3 1015 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 TREX2Q9BQ50 279 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 SF3B5Q9BWJ5 86 aaKnown RBP3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 RBM38Q9H0Z9 239 aaKnown RBP3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 ISCUQ9H1K1 167 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 SH2D4AQ9H788 454 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 MAP6D1Q9H9H5 199 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 SMYD2Q9NRG4 433 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 HIF1ANQ9NWT6 349 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 NDRG3Q9UGV2 375 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 HAO1Q9UJM8 370 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 NAALADL1Q9UQQ1 740 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 KDM3AQ9Y4C1 1321 aa3.91□□□□□ -1.78
HMGB1P36-201ENST00000487709 A0A0G2JK05 382 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 RPS10-NUDT3A0A1W2PQS6 291 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 A0A1W2PRG0 241 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 PI4KAP2A4QPH2 592 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 IFITM10A6NMD0 228 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 KDM4EB2RXH2 506 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 CHL1O00533 1208 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 ITM2AO43736 263 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 IPO7O95373 1038 aaKnown RBP3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 ARSBP15848 533 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 CDH2P19022 906 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 TNFRSF1BP20333 461 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 GPTP24298 496 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 CHATP28329 748 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 PPARGP37231 505 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 CLCN5P51795 746 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 EIF5P55010 431 aaKnown RBP3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 RPS3AP61247 264 aaKnown RBP3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 DCAF7P61962 342 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 OLR1P78380 273 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 PRAMEP78395 509 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 PPATQ06203 517 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 FAM27E3Q08E93 113 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 CAPSQ13938 189 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 CRYMQ14894 314 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 RNPS1Q15287 305 aaKnown RBP3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 WASHC2DQ5SRD0 308 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 TXNDC8Q6A555 127 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 ITPRIPL1Q6GPH6 555 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 C1orf122Q6ZSJ8 110 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 Q6ZTK2 550 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 RBFAQ8N0V3 343 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 CADM3Q8N126 398 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 NGEFQ8N5V2 710 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 FRMD1Q8N878 549 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 KDM1BQ8NB78 822 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 SCCPDHQ8NBX0 429 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 B4GALNT2Q8NHY0 566 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 ASB5Q8WWX0 329 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 ZNF479Q96JC4 524 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 ZNF570Q96NI8 536 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 YME1L1Q96TA2 773 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 WDR77Q9BQA1 342 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 MXRA8Q9BRK3 442 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 SYNCQ9H7C4 482 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 BRF2Q9HAW0 419 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 RRP7BPQ9NSQ0 103 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 SIRT3Q9NTG7 399 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 TBC1D22BQ9NU19 505 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 DLGAP2Q9P1A6 1054 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 IL36RNQ9UBH0 155 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 HSPB7Q9UBY9 170 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 FZD10Q9ULW2 581 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 ERVK-11Q9UQG0 969 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 LYVE1Q9Y5Y7 322 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 KCNE2Q9Y6J6 123 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 TTC3P53804 2025 aa3.9□□□□□ -1.79
HMGB1P36-201ENST00000487709 A0A1W2PPC1 479 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 CBY3A6NI87 242 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 AKR1B15C9JRZ8 316 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 AP3D1O14617 1153 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 BCAT2O15382 392 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 EPN2O95208 641 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 CLDN7O95471 211 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 HSP90AA1P07900 732 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms