RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 CCDC195A0A1B0GUA6 201 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 WDR91A4D1P6 747 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 GOLGA8TH3BQL2 631 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 SCAMP3O14828 347 aaKnown RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 PLIN3O60664 434 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 PENKP01210 267 aaPredicted RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 KPNA2P52292 529 aaKnown RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 SLC12A2P55011 1212 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 IFT88Q13099 833 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 USP4Q13107 963 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 GRM3Q14832 879 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 LINGO4Q6UY18 593 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 MICALL1Q8N3F8 863 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 GBP7Q8N8V2 638 aaPredicted RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 OR6P1Q8NGX9 317 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 E2F7Q96AV8 911 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 ACTR5Q9H9F9 607 aaPredicted RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 PIDD1Q9HB75 910 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 ACTL7AQ9Y615 435 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 ANKRD66B4E2M5 251 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 GLP2RO95838 553 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 C2P06681 752 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 STMN1P16949 149 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 ALDH3A1P30838 453 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 CSRP3P50461 194 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 ZNF77Q15935 545 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 RAPH1Q70E73 1250 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 SDCCAG8Q86SQ7 713 aaPredicted RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 CLEC14AQ86T13 490 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 CILP2Q8IUL8 1156 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 RDH11Q8TC12 318 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 WFDC5Q8TCV5 224 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 HDAC10Q969S8 669 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 ISG20Q96AZ6 181 aaKnown RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 EXOC2Q96KP1 924 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 SLC2A11Q9BYW1 496 aa20.47■□□□□ 0.87
PHF1-209ENST00000487667 NLE1Q9NVX2 485 aaPredicted RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 MRPS23Q9Y3D9 190 aaKnown RBP20.47■□□□□ 0.87
PHF1-209ENST00000487667 A0A087X1B8 175 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 FAM95CA0A1B0GW59 222 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 PFDN6O15212 129 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 IGSF6O95976 241 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 OGNP20774 298 aaKnown RBP20.46■□□□□ 0.87
PHF1-209ENST00000487667 PBX2P40425 430 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 GRIA4P48058 902 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 RAB10P61026 200 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 CTBP1Q13363 440 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 GLT6D1Q7Z4J2 308 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 GRASPQ7Z6J2 395 aaPredicted RBP20.46■□□□□ 0.87
PHF1-209ENST00000487667 DENND6AQ8IWF6 608 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 IRF7Q92985 503 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 ATXN7L3BQ96GX2 97 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 C7orf26Q96N11 449 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 CDCA3Q99618 268 aaPredicted RBP20.46■□□□□ 0.87
PHF1-209ENST00000487667 KDM4CQ9H3R0 1056 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 MARK1Q9P0L2 795 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 GGT7Q9UJ14 662 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 VPS9D1Q9Y2B5 631 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 MYLKQ15746 1914 aa20.46■□□□□ 0.87
PHF1-209ENST00000487667 SOCS5O75159 536 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 GJB3O75712 270 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 PRLP01236 227 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 GRK2P25098 689 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 LIG3P49916 1009 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 SMAD1Q15797 465 aaKnown RBP20.45■□□□□ 0.86
PHF1-209ENST00000487667 SLC5A9Q2M3M2 681 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 TSNAXIP1Q2TAA8 658 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 CMC1Q7Z7K0 106 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 APCDD1Q8J025 514 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 ZNF707Q96C28 371 aaPredicted RBP20.45■□□□□ 0.86
PHF1-209ENST00000487667 C12orf65Q9H3J6 166 aaKnown RBP20.45■□□□□ 0.86
PHF1-209ENST00000487667 TLE6Q9H808 572 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 SPHK2Q9NRA0 654 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 CCL26Q9Y258 94 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 YBX2Q9Y2T7 364 aaKnown RBP20.45■□□□□ 0.86
PHF1-209ENST00000487667 ACOT9Q9Y305 439 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 CCT8L1PA6NM43 557 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 PROCP04070 461 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 BGNP21810 368 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 LPOP22079 712 aaPredicted RBP20.45■□□□□ 0.86
PHF1-209ENST00000487667 GABRB3P28472 473 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 PRKAA2P54646 552 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 TMPRSS15P98073 1019 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 PITRM1Q5JRX3 1037 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 ARMC12Q5T9G4 340 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 AFTPHQ6ULP2 937 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 OTOAQ7RTW8 1153 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 CELF5Q8N6W0 485 aaKnown RBP20.45■□□□□ 0.86
PHF1-209ENST00000487667 LPCAT1Q8NF37 534 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 PPP1R14CQ8TAE6 165 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 BHMTQ93088 406 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 PPP2R3CQ969Q6 453 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 LMLNQ96KR4 655 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 TCF12Q99081 682 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 TRIM55Q9BYV6 548 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 CEP44Q9C0F1 390 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 SMG9Q9H0W8 520 aaKnown RBP20.45■□□□□ 0.86
PHF1-209ENST00000487667 SLCO1B3Q9NPD5 702 aa20.45■□□□□ 0.86
PHF1-209ENST00000487667 DZANK1Q9NVP4 752 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms