RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 GULP1Q9UBP9 304 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 PADI4Q9UM07 663 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 MYO6Q9UM54 1294 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 SATB2Q9UPW6 733 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 BPTFQ12830 3046 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 PMS2P1A4D2B8 440 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 ARHGAP42A6NI28 874 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 ATXN7O15265 892 aaPredicted RBP12.29□□□□□ -0.44
VPS16-208ENST00000487461 PALMO75781 387 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 FTLP02792 175 aaPredicted RBP12.29□□□□□ -0.44
VPS16-208ENST00000487461 DESP17661 470 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 ERCC2P18074 760 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 MIPP30301 263 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 BLKP51451 505 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 HK3P52790 923 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 PCBP4P57723 403 aaKnown RBP12.29□□□□□ -0.44
VPS16-208ENST00000487461 ERVPABLB-1P60509 514 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 CXADRP78310 365 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 TYRO3Q06418 890 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 AGERQ15109 404 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 TCEA2Q15560 299 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 ALG11Q2TAA5 492 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 CCDC183Q5T5S1 534 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 KCTD16Q68DU8 428 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 ERAP2Q6P179 960 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 BRAT1Q6PJG6 821 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 RBM44Q6ZP01 1051 aaKnown RBP12.29□□□□□ -0.44
VPS16-208ENST00000487461 RFX8Q6ZV50 586 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 CYP4V2Q6ZWL3 525 aaPredicted RBP12.29□□□□□ -0.44
VPS16-208ENST00000487461 ZNF571Q7Z3V5 609 aaPredicted RBP12.29□□□□□ -0.44
VPS16-208ENST00000487461 RD3Q7Z3Z2 195 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 GRAMD1AQ96CP6 724 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 SLC46A1Q96NT5 459 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 TUBGCP5Q96RT8 1024 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 SNRNP25Q9BV90 132 aaKnown RBP12.29□□□□□ -0.44
VPS16-208ENST00000487461 EDEM3Q9BZQ6 932 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 HAUS4Q9H6D7 363 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 ATP8A1Q9Y2Q0 1164 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 OR1A2Q9Y585 309 aa12.29□□□□□ -0.44
VPS16-208ENST00000487461 LRRC53A6NM62 1247 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 EIF3CLB5ME19 914 aaKnown RBP12.28□□□□□ -0.44
VPS16-208ENST00000487461 TK2O00142 265 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 DFFAO00273 331 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 DAPK3O43293 454 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 TCEA3O75764 348 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 PCCBP05166 539 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 CTSEP14091 401 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 MMP12P39900 470 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 SRP54P61011 504 aaKnown RBP12.28□□□□□ -0.44
VPS16-208ENST00000487461 NSUN2Q08J23 767 aaKnown RBP eCLIP12.28□□□□□ -0.44
VPS16-208ENST00000487461 RALGDSQ12967 914 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 NFATC4Q14934 902 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 ELOCQ15369 112 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 C3orf38Q5JPI3 329 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 CFAP58Q5T655 872 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 E4F1Q66K89 784 aaPredicted RBP12.28□□□□□ -0.44
VPS16-208ENST00000487461 ESRP1Q6NXG1 681 aaKnown RBP12.28□□□□□ -0.44
VPS16-208ENST00000487461 PPP1R2P3Q6NXS1 205 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 LVRNQ6Q4G3 990 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 IGF2-ASQ6U949 168 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 PCSK4Q6UW60 755 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 TP53INP2Q8IXH6 220 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 FSTL5Q8N475 847 aaPredicted RBP12.28□□□□□ -0.44
VPS16-208ENST00000487461 NPWQ8N729 165 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 PLA2G15Q8NCC3 412 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 NAT6Q93015 286 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 NAP1L5Q96NT1 182 aaPredicted RBP12.28□□□□□ -0.44
VPS16-208ENST00000487461 EIF3CQ99613 913 aaKnown RBP12.28□□□□□ -0.44
VPS16-208ENST00000487461 CCDC3Q9BQI4 270 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 AIPL1Q9NZN9 384 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 CWC15Q9P013 229 aaKnown RBP12.28□□□□□ -0.44
VPS16-208ENST00000487461 SIRPGQ9P1W8 387 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 DOLKQ9UPQ8 538 aa12.28□□□□□ -0.44
VPS16-208ENST00000487461 TEX51A0A1B0GUA7 166 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 CFAP69A5D8W1 941 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 DDX3XO00571 662 aaKnown RBP eCLIP12.27□□□□□ -0.45
VPS16-208ENST00000487461 NTN3O00634 580 aaPredicted RBP12.27□□□□□ -0.45
VPS16-208ENST00000487461 TRAFD1O14545 582 aaPredicted RBP12.27□□□□□ -0.45
VPS16-208ENST00000487461 KLK10O43240 276 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 C1QL1O75973 258 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 RNF8O76064 485 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 RECQL5O94762 991 aaPredicted RBP12.27□□□□□ -0.45
VPS16-208ENST00000487461 RASGRP1O95267 797 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 ALPIP09923 528 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 GZMAP12544 262 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 GM2AP17900 193 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 HTR1BP28222 390 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 RBMS1P29558 406 aaKnown RBP12.27□□□□□ -0.45
VPS16-208ENST00000487461 SERPINA4P29622 427 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 HCAR3P49019 387 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 PDX1P52945 283 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 BCL2L1Q07817 233 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 MTM1Q13496 603 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 ASIC2Q16515 512 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 ANO6Q4KMQ2 910 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 PPP6R3Q5H9R7 873 aaPredicted RBP12.27□□□□□ -0.45
VPS16-208ENST00000487461 LIPIQ6XZB0 460 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 KYQ8NBH2 561 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 LSM14AQ8ND56 463 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms